Transcript: ENST00000508179.4 SNHG18-201

Description

small nucleolar RNA host gene 18 [Source:HGNC Symbol;Acc:HGNC:49007]

Location

Chromosome 5: 9,546,176-9,550,725 forward strand.

About this transcript

This transcript has 3 exons and maps to 263 oligo probes.

Gene

This transcript is a product of gene ENSG00000250786.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000815268.1	SNHG18-205	1173	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000509788.4	SNHG18-202	1989	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000508179.4	SNHG18-201	1939	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000815277.1	SNHG18-214	1538	No protein	-	lncRNA	-	-
ENST00000702096.2	SNHG18-204	1489	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000815276.1	SNHG18-213	1397	No protein	-	lncRNA	-	-
ENST00000815275.1	SNHG18-212	1396	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000815278.1	SNHG18-215	1379	No protein	-	lncRNA	-	-
ENST00000815286.1	SNHG18-223	1301	No protein	-	lncRNA	-	-
ENST00000815269.1	SNHG18-206	1289	No protein	-	lncRNA	-	-
ENST00000815280.1	SNHG18-217	1284	No protein	-	lncRNA	-	-
ENST00000815289.1	SNHG18-226	1168	No protein	-	lncRNA	-	-
ENST00000815271.1	SNHG18-208	810	No protein	-	lncRNA	-	-
ENST00000815272.1	SNHG18-209	783	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000815274.1	SNHG18-211	750	No protein	-	lncRNA	-	-
ENST00000815273.1	SNHG18-210	701	No protein	-	lncRNA	-	-
ENST00000815279.1	SNHG18-216	559	No protein	-	lncRNA	-	-
ENST00000815288.1	SNHG18-225	556	No protein	-	lncRNA	-	-
ENST00000815282.1	SNHG18-219	521	No protein	-	lncRNA	-	-
ENST00000815270.1	SNHG18-207	519	No protein	-	lncRNA	-	-
ENST00000815284.1	SNHG18-221	466	No protein	-	lncRNA	-	-
ENST00000655411.1	SNHG18-203	436	No protein	-	lncRNA	-	-
ENST00000815281.1	SNHG18-218	420	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000815283.1	SNHG18-220	416	No protein	-	lncRNA	-	-
ENST00000815285.1	SNHG18-222	318	No protein	-	lncRNA	-	-
ENST00000815287.1	SNHG18-224	316	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,939 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000508179.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000508179.4 SNHG18-201

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Transcript: ENST00000508179.4 SNHG18-201

Summary

About Us

Get help

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