Transcript: ENST00000505276.2

Description

novel transcript

Location

Chromosome 12: 3,296,202-3,300,224 reverse strand.

About this transcript

This transcript has 2 exons and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSG00000291189.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000747211.1	-	1692	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000637529.1	-	3091	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000636557.1	-	2959	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000685534.2	-	2651	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505276.2	-	2303	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000689589.1	-	1562	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747214.1	-	1557	No protein	-	lncRNA	-	-
ENST00000747256.1	-	1508	No protein	-	lncRNA	-	-
ENST00000747267.1	-	1455	No protein	-	lncRNA	-	-
ENST00000686557.2	-	1452	No protein	-	lncRNA	-	-
ENST00000747245.1	-	1419	No protein	-	lncRNA	-	-
ENST00000689465.2	-	1404	No protein	-	lncRNA	-	-
ENST00000747264.1	-	1397	No protein	-	lncRNA	-	-
ENST00000747244.1	-	1393	No protein	-	lncRNA	-	-
ENST00000689237.2	-	1315	No protein	-	lncRNA	-	-
ENST00000747239.1	-	1275	No protein	-	lncRNA	-	-
ENST00000747220.1	-	1212	No protein	-	lncRNA	-	-
ENST00000747227.1	-	1205	No protein	-	lncRNA	-	-
ENST00000747235.1	-	1205	No protein	-	lncRNA	-	-
ENST00000747236.1	-	1190	No protein	-	lncRNA	-	-
ENST00000747215.1	-	1140	No protein	-	lncRNA	-	-
ENST00000747240.1	-	1139	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747218.1	-	1137	No protein	-	lncRNA	-	-
ENST00000692435.1	-	1135	No protein	-	lncRNA	-	-
ENST00000747230.1	-	1133	No protein	-	lncRNA	-	-
ENST00000747217.1	-	1129	No protein	-	lncRNA	-	-
ENST00000747226.1	-	1126	No protein	-	lncRNA	-	-
ENST00000747241.1	-	1118	No protein	-	lncRNA	-	-
ENST00000747275.1	-	1107	No protein	-	lncRNA	-	-
ENST00000747216.1	-	1074	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747222.1	-	1074	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686978.3	-	1073	No protein	-	lncRNA	-	-
ENST00000747259.1	-	1069	No protein	-	lncRNA	-	-
ENST00000747262.1	-	1051	No protein	-	lncRNA	-	-
ENST00000747237.1	-	1035	No protein	-	lncRNA	-	-
ENST00000687853.1	-	1027	No protein	-	lncRNA	-	-
ENST00000747247.1	-	1015	No protein	-	lncRNA	-	-
ENST00000747250.1	-	1014	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747231.1	-	994	No protein	-	lncRNA	-	-
ENST00000747234.1	-	983	No protein	-	lncRNA	-	-
ENST00000693097.3	-	981	No protein	-	lncRNA	-	-
ENST00000747219.1	-	978	No protein	-	lncRNA	-	-
ENST00000747253.1	-	977	No protein	-	lncRNA	-	-
ENST00000747213.1	-	974	No protein	-	lncRNA	-	-
ENST00000747232.1	-	971	No protein	-	lncRNA	-	-
ENST00000747251.1	-	970	No protein	-	lncRNA	-	-
ENST00000747266.1	-	963	No protein	-	lncRNA	-	-
ENST00000747268.1	-	958	No protein	-	lncRNA	-	-
ENST00000747261.1	-	947	No protein	-	lncRNA	-	-
ENST00000747221.1	-	944	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747242.1	-	942	No protein	-	lncRNA	-	-
ENST00000701216.1	-	925	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747252.1	-	919	No protein	-	lncRNA	-	-
ENST00000747229.1	-	917	No protein	-	lncRNA	-	-
ENST00000747224.1	-	914	No protein	-	lncRNA	-	-
ENST00000747212.1	-	907	No protein	-	lncRNA	-	-
ENST00000688836.1	-	899	No protein	-	lncRNA	-	-
ENST00000747228.1	-	896	No protein	-	lncRNA	-	-
ENST00000747263.1	-	887	No protein	-	lncRNA	-	-
ENST00000747265.1	-	858	No protein	-	lncRNA	-	-
ENST00000747255.1	-	856	No protein	-	lncRNA	-	-
ENST00000747223.1	-	852	No protein	-	lncRNA	-	-
ENST00000747274.1	-	839	No protein	-	lncRNA	-	-
ENST00000747233.1	-	833	No protein	-	lncRNA	-	-
ENST00000747254.1	-	829	No protein	-	lncRNA	-	-
ENST00000747225.1	-	801	No protein	-	lncRNA	-	-
ENST00000747249.1	-	789	No protein	-	lncRNA	-	-
ENST00000747243.1	-	786	No protein	-	lncRNA	-	-
ENST00000701724.1	-	784	No protein	-	lncRNA	-	-
ENST00000686448.3	-	736	No protein	-	lncRNA	-	-
ENST00000747248.1	-	733	No protein	-	lncRNA	-	-
ENST00000747257.1	-	708	No protein	-	lncRNA	-	-
ENST00000747246.1	-	702	No protein	-	lncRNA	-	-
ENST00000747258.1	-	682	No protein	-	lncRNA	-	-
ENST00000747238.1	-	663	No protein	-	lncRNA	-	-
ENST00000747273.1	-	599	No protein	-	lncRNA	-	-
ENST00000747271.1	-	522	No protein	-	lncRNA	-	-
ENST00000700804.1	-	500	No protein	-	lncRNA	-	-
ENST00000702300.2	-	482	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000747270.1	-	428	No protein	-	lncRNA	-	-
ENST00000747269.1	-	414	No protein	-	lncRNA	-	-
ENST00000747260.1	-	380	No protein	-	lncRNA	-	-
ENST00000747272.1	-	323	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,303 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000505276.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000505276.2

Summary

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Transcript: ENST00000505276.2

Summary

About Us

Get help

Our sister sites

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