Human (GRCh38.p14)
Description

protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]

Gene Synonyms

PCDH-X, PCDH11, PCDHX, PPP1R119

Location
About this transcript

This transcript has 7 exons, is annotated with 58 domains and features, is associated with 263161 variant alleles and maps to 351 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000682573.1PCDH11X-20990221347aaENSP00000507225.1
 
Protein coding
CCDS14461Q9BZA7-1 NM_032968.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4
ENST00000373094.5PCDH11X-20591791347aaENSP00000362186.1
 
Protein coding
CCDS14461Q9BZA7-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000373097.5PCDH11X-20691461337aaENSP00000362189.1
 
Protein coding
CCDS14462Q9BZA7-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000406881.3PCDH11X-20741561339aaENSP00000384758.1
 
Protein coding
CCDS55459Q9BZA7-8 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000361655.6PCDH11X-20241261329aaENSP00000355105.2
 
Protein coding
CCDS55460Q9BZA7-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000373088.5PCDH11X-20440691310aaENSP00000362180.1
 
Protein coding
CCDS55461Q9BZA7-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000504220.6PCDH11X-20840171065aaENSP00000423762.1
 
Protein coding
CCDS55458Q9BZA7-6 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000298274.12PCDH11X-2014767No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000361724.3PCDH11X-2034603No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,017 bps, Translation length: 1,065 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BZA7

CCDS

This transcript is a member of the Human CCDS set: CCDS55458

Transcript Support Level (TSL)

TSL:1

Version

ENST00000504220.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.