Transcript: ENST00000500823.4 GS1-24F4.2-201

Description

uncharacterized LOC100652791 [Source:NCBI gene (formerly Entrezgene);Acc:100652791]

Location

Chromosome 8: 6,835,515-6,842,458 forward strand.

About this transcript

This transcript has 3 exons and maps to 234 oligo probes.

Gene

This transcript is a product of gene ENSG00000245857.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000531701.2	GS1-24F4.2-202	838	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000772765.1	GS1-24F4.2-212	1659	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657010.1	GS1-24F4.2-204	1557	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772766.1	GS1-24F4.2-213	1237	No protein	-	lncRNA	-	-
ENST00000772768.1	GS1-24F4.2-215	1168	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000500823.4	GS1-24F4.2-201	1150	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000772775.1	GS1-24F4.2-222	1125	No protein	-	lncRNA	-	-
ENST00000772767.1	GS1-24F4.2-214	1100	No protein	-	lncRNA	-	-
ENST00000772769.1	GS1-24F4.2-216	1056	No protein	-	lncRNA	-	-
ENST00000772773.1	GS1-24F4.2-220	1047	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701456.2	GS1-24F4.2-205	1007	No protein	-	lncRNA	-	-
ENST00000772760.1	GS1-24F4.2-207	950	No protein	-	lncRNA	-	-
ENST00000772774.1	GS1-24F4.2-221	936	No protein	-	lncRNA	-	-
ENST00000772771.1	GS1-24F4.2-218	920	No protein	-	lncRNA	-	-
ENST00000772772.1	GS1-24F4.2-219	856	No protein	-	lncRNA	-	-
ENST00000772763.1	GS1-24F4.2-210	739	No protein	-	lncRNA	-	-
ENST00000772761.1	GS1-24F4.2-208	645	No protein	-	lncRNA	-	-
ENST00000655804.2	GS1-24F4.2-203	600	No protein	-	lncRNA	-	-
ENST00000772762.1	GS1-24F4.2-209	538	No protein	-	lncRNA	-	-
ENST00000772759.1	GS1-24F4.2-206	513	No protein	-	lncRNA	-	-
ENST00000772764.1	GS1-24F4.2-211	367	No protein	-	lncRNA	-	-
ENST00000772770.1	GS1-24F4.2-217	357	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,150 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000500823.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000500823.4 GS1-24F4.2-201

Summary

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Transcript: ENST00000500823.4 GS1-24F4.2-201

Summary

About Us

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