Human (GRCh38.p14)
Description

BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]

Gene Synonyms

BRCC1, FANCS, PPP1R53, RNF53

Location
About this transcript

This transcript has 23 exons, is annotated with 35 domains and features, is associated with 58254 variant alleles and maps to 1020 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357654.9BRCA1-20370881863aaENSP00000350283.3
 
Protein coding
CCDS11453P38398-1 NM_007294.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000618469.2BRCA1-22676131863aaENSP00000478114.2
 
Protein coding
CCDS11453G1UI37 -GENCODE basicAPPRIS P4TSL:1
ENST00000652672.2BRCA1-23273201816aaENSP00000498906.2
 
Protein coding
CCDS11459A0A494C182 --
ENST00000471181.7BRCA1-20972701884aaENSP00000418960.2
 
Protein coding
CCDS11456P38398-7 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000494123.6BRCA1-22171681863aaENSP00000419103.2
 
Protein coding
CCDS11453Q3B891 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000470026.6BRCA1-20871471863aaENSP00000419274.2
 
Protein coding
CCDS11453E7EWN5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000461574.2BRCA1-20570821862aaENSP00000417241.2
 
Protein coding
H0Y850 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000476777.6BRCA1-21270751861aaENSP00000417554.2
 
Protein coding
E7EQW4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000489037.2BRCA1-21670561837aaENSP00000420781.2
 
Protein coding
E7ENB7 -GENCODE basicTSL:4
ENST00000477152.6BRCA1-21370101837aaENSP00000419988.2
 
Protein coding
E9PH68 -GENCODE basicTSL:1
ENST00000634433.2BRCA1-22869911822aaENSP00000489431.2
 
Protein coding
A0A0U1RRA9 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000473961.6BRCA1-21169621821aaENSP00000420201.2
 
Protein coding
H0Y8D8 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000644379.2BRCA1-23063631885aaENSP00000496570.2
 
Protein coding
A0A2R8Y7V5 -GENCODE basicAPPRIS ALT2
ENST00000497488.2BRCA1-22263351567aaENSP00000418986.2
 
Protein coding
C9IZW4 -GENCODE basicTSL:1
ENST00000493795.5BRCA1-21957321816aaENSP00000418775.1
 
Protein coding
CCDS11459P38398-8 -GENCODE basicTSL:5
ENST00000644555.2BRCA1-2313921713aaENSP00000494614.2
 
Protein coding
A0A2R8Y587 -GENCODE basic
ENST00000478531.6BRCA1-2143765759aaENSP00000420412.2
 
Protein coding
E7EUM2 -GENCODE basicTSL:1
ENST00000493919.6BRCA1-2203757713aaENSP00000418819.2
 
Protein coding
B7ZA85 -GENCODE basicTSL:2
ENST00000352993.7BRCA1-2013668721aaENSP00000312236.5
 
Protein coding
P38398-5 -GENCODE basicTSL:5
ENST00000468300.5BRCA1-2073273699aaENSP00000417148.1
 
Protein coding
CCDS11455P38398-6 -GENCODE basicTSL:1
ENST00000484087.6BRCA1-2152490717aaENSP00000419481.2
 
Protein coding
H0Y8B8 -GENCODE basicTSL:5
ENST00000491747.6BRCA1-2172379759aaENSP00000420705.2
 
Protein coding
CCDS11454P38398-3 -GENCODE basicTSL:5
ENST00000700182.1BRCA1-2362269544aaENSP00000514849.1
 
Protein coding
A0A8V8TPY7 -GENCODE basic
ENST00000591534.5BRCA1-2241282354aaENSP00000467329.1
 
Protein coding
K7EPC7 -GENCODE basicTSL:1
ENST00000586385.5BRCA1-223781173aaENSP00000465818.1
 
Protein coding
C6YB45 -GENCODE basicTSL:1
ENST00000591849.5BRCA1-22556396aaENSP00000465347.1
 
Protein coding
K7EJW3 -GENCODE basicTSL:1
ENST00000461221.5BRCA1-204569363aaENSP00000418548.1
 
Nonsense mediated decay
P38398-2 -TSL:1
ENST00000700183.1BRCA1-237177859aaENSP00000514850.1
 
Nonsense mediated decay
E9PC22 --
ENST00000492859.5BRCA1-218158459aaENSP00000420253.1
 
Nonsense mediated decay
E9PC22 -TSL:1
ENST00000642945.1BRCA1-229125581aaENSP00000495897.1
 
Nonsense mediated decay
A0A2R8Y6Y9 --
ENST00000461798.5BRCA1-20658263aaENSP00000417988.1
 
Nonsense mediated decay
P38398-2 -TSL:3
ENST00000700186.1BRCA1-240737No protein-
 
Protein coding CDS not defined
---
ENST00000700185.1BRCA1-239496No protein-
 
Protein coding CDS not defined
---
ENST00000621897.1BRCA1-227375No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000354071.8BRCA1-2024497No protein-
 
Retained intron
--TSL:1
ENST00000700081.1BRCA1-2332851No protein-
 
Retained intron
---
ENST00000700082.1BRCA1-2341653No protein-
 
Retained intron
---
ENST00000700083.1BRCA1-2351309No protein-
 
Retained intron
---
ENST00000700184.1BRCA1-238919No protein-
 
Retained intron
---
ENST00000472490.1BRCA1-210561No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 23, Coding exons: 22, Transcript length: 2,379 bps, Translation length: 759 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38398

CCDS

This transcript is a member of the Human CCDS set: CCDS11454

Transcript Support Level (TSL)

TSL:5

Version

ENST00000491747.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.