Transcript: ENST00000489670.1 LINC01205-201

Description

long intergenic non-protein coding RNA 1205 [Source:HGNC Symbol;Acc:HGNC:49636]

Location

Chromosome 3: 109,410,162-109,419,017 forward strand.

About this transcript

This transcript has 2 exons and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSG00000228980.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663929.1	LINC01205-207	1102	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659474.1	LINC01205-205	1700	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652897.2	LINC01205-203	1588	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000497996.1	LINC01205-202	1493	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000489670.1	LINC01205-201	1331	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000670331.1	LINC01205-208	1317	No protein	-	lncRNA	-	-
ENST00000658412.1	LINC01205-204	1284	No protein	-	lncRNA	-	-
ENST00000661437.1	LINC01205-206	979	No protein	-	lncRNA	-	-
ENST00000726646.1	LINC01205-217	891	No protein	-	lncRNA	-	-
ENST00000726641.1	LINC01205-212	680	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000804758.1	LINC01205-218	675	No protein	-	lncRNA	-	-
ENST00000726644.1	LINC01205-215	575	No protein	-	lncRNA	-	-
ENST00000726638.1	LINC01205-209	550	No protein	-	lncRNA	-	-
ENST00000726639.1	LINC01205-210	504	No protein	-	lncRNA	-	-
ENST00000726640.1	LINC01205-211	486	No protein	-	lncRNA	-	-
ENST00000726645.1	LINC01205-216	483	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726642.1	LINC01205-213	398	No protein	-	lncRNA	-	-
ENST00000726643.1	LINC01205-214	370	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,331 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000489670.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000489670.1 LINC01205-201

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Transcript: ENST00000489670.1 LINC01205-201

Summary

About Us

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