Transcript: ENST00000474168.6 LINC01192-203

Description

long intergenic non-protein coding RNA 1192 [Source:HGNC Symbol;Acc:HGNC:37197]

Gene Synonyms

CT64

Location

Chromosome 3: 163,199,582-163,303,314 reverse strand.

About this transcript

This transcript has 8 exons and maps to 427 oligo probes.

Gene

This transcript is a product of gene ENSG00000241369.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000658280.1	LINC01192-223	1779	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654755.1	LINC01192-212	5056	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666445.1	LINC01192-245	1953	No protein	-	lncRNA	-	-
ENST00000660789.1	LINC01192-229	1809	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654609.1	LINC01192-211	1761	No protein	-	lncRNA	-	-
ENST00000668405.1	LINC01192-248	1547	No protein	-	lncRNA	-	-
ENST00000470546.5	LINC01192-202	1519	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000666234.1	LINC01192-243	1511	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661702.1	LINC01192-231	1495	No protein	-	lncRNA	-	-
ENST00000721790.1	LINC01192-255	1453	No protein	-	lncRNA	-	-
ENST00000662504.1	LINC01192-235	1445	No protein	-	lncRNA	-	-
ENST00000661439.1	LINC01192-230	1421	No protein	-	lncRNA	-	-
ENST00000671181.1	LINC01192-253	1411	No protein	-	lncRNA	-	-
ENST00000663767.1	LINC01192-237	1359	No protein	-	lncRNA	-	-
ENST00000670024.1	LINC01192-250	1324	No protein	-	lncRNA	-	-
ENST00000664909.1	LINC01192-240	1283	No protein	-	lncRNA	-	-
ENST00000663627.1	LINC01192-236	1278	No protein	-	lncRNA	-	-
ENST00000662097.1	LINC01192-234	1256	No protein	-	lncRNA	-	-
ENST00000657261.1	LINC01192-220	1250	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659031.1	LINC01192-224	1231	No protein	-	lncRNA	-	-
ENST00000668425.1	LINC01192-249	1229	No protein	-	lncRNA	-	-
ENST00000662016.1	LINC01192-232	1206	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659266.1	LINC01192-225	1200	No protein	-	lncRNA	-	-
ENST00000667319.1	LINC01192-246	1180	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000488173.6	LINC01192-204	1179	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000670655.1	LINC01192-252	1169	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655228.1	LINC01192-213	1160	No protein	-	lncRNA	-	-
ENST00000666364.1	LINC01192-244	1150	No protein	-	lncRNA	-	-
ENST00000488287.2	LINC01192-205	1122	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000657422.1	LINC01192-221	1109	No protein	-	lncRNA	-	-
ENST00000665928.1	LINC01192-242	1096	No protein	-	lncRNA	-	-
ENST00000664365.1	LINC01192-239	1092	No protein	-	lncRNA	-	-
ENST00000656322.1	LINC01192-219	1068	No protein	-	lncRNA	-	-
ENST00000665626.1	LINC01192-241	1054	No protein	-	lncRNA	-	-
ENST00000670179.1	LINC01192-251	1046	No protein	-	lncRNA	-	-
ENST00000655584.1	LINC01192-214	1009	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655806.1	LINC01192-216	994	No protein	-	lncRNA	-	-
ENST00000667576.1	LINC01192-247	982	No protein	-	lncRNA	-	-
ENST00000658030.1	LINC01192-222	966	No protein	-	lncRNA	-	-
ENST00000664163.1	LINC01192-238	923	No protein	-	lncRNA	-	-
ENST00000655980.1	LINC01192-217	917	No protein	-	lncRNA	-	-
ENST00000659796.1	LINC01192-227	900	No protein	-	lncRNA	-	-
ENST00000659789.1	LINC01192-226	894	No protein	-	lncRNA	-	-
ENST00000474168.6	LINC01192-203	881	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000721791.1	LINC01192-256	880	No protein	-	lncRNA	-	-
ENST00000492553.6	LINC01192-207	852	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000662054.1	LINC01192-233	829	No protein	-	lncRNA	-	-
ENST00000660784.1	LINC01192-228	822	No protein	-	lncRNA	-	-
ENST00000489012.5	LINC01192-206	818	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000721789.1	LINC01192-254	816	No protein	-	lncRNA	-	-
ENST00000655719.1	LINC01192-215	772	No protein	-	lncRNA	-	-
ENST00000721792.1	LINC01192-257	772	No protein	-	lncRNA	-	-
ENST00000494897.5	LINC01192-209	736	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000656281.1	LINC01192-218	720	No protein	-	lncRNA	-	-
ENST00000653088.1	LINC01192-210	711	No protein	-	lncRNA	-	-
ENST00000721794.1	LINC01192-259	696	No protein	-	lncRNA	-	-
ENST00000493473.2	LINC01192-208	638	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000462928.5	LINC01192-201	584	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000817215.1	LINC01192-262	575	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721793.1	LINC01192-258	482	No protein	-	lncRNA	-	-
ENST00000721796.1	LINC01192-261	481	No protein	-	lncRNA	-	-
ENST00000721795.1	LINC01192-260	397	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 881 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000474168.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000474168.6 LINC01192-203

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Transcript: ENST00000474168.6 LINC01192-203

Summary

About Us

Get help

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