Transcript: ENST00000471222.3 LINC01214-201

Description

long intergenic non-protein coding RNA 1214 [Source:HGNC Symbol;Acc:HGNC:49650]

Location

Chromosome 3: 150,265,408-150,296,605 reverse strand.

About this transcript

This transcript has 4 exons and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSG00000243550.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000716187.1	LINC01214-206	933	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000670456.1	LINC01214-203	2949	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000692847.3	LINC01214-204	2194	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749916.1	LINC01214-210	1132	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716190.1	LINC01214-209	1090	No protein	-	lncRNA	-	-
ENST00000716189.1	LINC01214-208	1077	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749928.1	LINC01214-222	846	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749929.1	LINC01214-223	610	No protein	-	lncRNA	-	-
ENST00000749938.1	LINC01214-232	607	No protein	-	lncRNA	-	-
ENST00000749927.1	LINC01214-221	586	No protein	-	lncRNA	-	-
ENST00000716188.1	LINC01214-207	569	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749932.1	LINC01214-226	569	No protein	-	lncRNA	-	-
ENST00000749936.1	LINC01214-230	561	No protein	-	lncRNA	-	-
ENST00000749926.1	LINC01214-220	547	No protein	-	lncRNA	-	-
ENST00000749933.1	LINC01214-227	541	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471222.3	LINC01214-201	522	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000665600.2	LINC01214-202	490	No protein	-	lncRNA	-	-
ENST00000716186.1	LINC01214-205	488	No protein	-	lncRNA	-	-
ENST00000749945.1	LINC01214-239	484	No protein	-	lncRNA	-	-
ENST00000749924.1	LINC01214-218	481	No protein	-	lncRNA	-	-
ENST00000749934.1	LINC01214-228	476	No protein	-	lncRNA	-	-
ENST00000749918.1	LINC01214-212	460	No protein	-	lncRNA	-	-
ENST00000749930.1	LINC01214-224	455	No protein	-	lncRNA	-	-
ENST00000749922.1	LINC01214-216	453	No protein	-	lncRNA	-	-
ENST00000749919.1	LINC01214-213	432	No protein	-	lncRNA	-	-
ENST00000749931.1	LINC01214-225	431	No protein	-	lncRNA	-	-
ENST00000749925.1	LINC01214-219	426	No protein	-	lncRNA	-	-
ENST00000749923.1	LINC01214-217	425	No protein	-	lncRNA	-	-
ENST00000749941.1	LINC01214-235	423	No protein	-	lncRNA	-	-
ENST00000749939.1	LINC01214-233	418	No protein	-	lncRNA	-	-
ENST00000749935.1	LINC01214-229	415	No protein	-	lncRNA	-	-
ENST00000749917.1	LINC01214-211	407	No protein	-	lncRNA	-	-
ENST00000749942.1	LINC01214-236	407	No protein	-	lncRNA	-	-
ENST00000749921.1	LINC01214-215	388	No protein	-	lncRNA	-	-
ENST00000749944.1	LINC01214-238	385	No protein	-	lncRNA	-	-
ENST00000749937.1	LINC01214-231	364	No protein	-	lncRNA	-	-
ENST00000749940.1	LINC01214-234	361	No protein	-	lncRNA	-	-
ENST00000749943.1	LINC01214-237	356	No protein	-	lncRNA	-	-
ENST00000749920.1	LINC01214-214	350	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 522 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000471222.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

dotter confirmed [Definitions]

QC splicing correct

Transcript: ENST00000471222.3 LINC01214-201

Summary

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Transcript: ENST00000471222.3 LINC01214-201

Summary

About Us

Get help

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