Transcript: ENST00000471057.2 FAM182A-204

Description

family with sequence similarity 182 member A [Source:HGNC Symbol;Acc:HGNC:16222]

Gene Synonyms

BB329D4.1, C20ORF91, C20ORF91A

Location

Chromosome 20: 26,063,831-26,082,955 forward strand.

About this transcript

This transcript has 6 exons and maps to 733 oligo probes.

Gene

This transcript is a product of gene ENSG00000125804.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000716750.1	FAM182A-222	862	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000376398.6	FAM182A-201	5070	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000667322.1	FAM182A-214	2081	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822639.1	FAM182A-301	1990	No protein	-	lncRNA	-	-
ENST00000822621.1	FAM182A-284	1936	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822586.1	FAM182A-249	1824	No protein	-	lncRNA	-	-
ENST00000822622.1	FAM182A-285	1723	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822589.1	FAM182A-252	1558	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822623.1	FAM182A-286	1531	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653942.2	FAM182A-208	1460	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668826.1	FAM182A-216	1452	No protein	-	lncRNA	-	-
ENST00000822633.1	FAM182A-295	1369	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822640.1	FAM182A-302	1292	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822636.1	FAM182A-298	1237	No protein	-	lncRNA	-	-
ENST00000822599.1	FAM182A-262	1182	No protein	-	lncRNA	-	-
ENST00000822635.1	FAM182A-297	1127	No protein	-	lncRNA	-	-
ENST00000822593.1	FAM182A-256	1093	No protein	-	lncRNA	-	-
ENST00000822656.1	FAM182A-314	1092	No protein	-	lncRNA	-	-
ENST00000670756.1	FAM182A-219	1075	No protein	-	lncRNA	-	-
ENST00000822587.1	FAM182A-250	1068	No protein	-	lncRNA	-	-
ENST00000652966.1	FAM182A-206	1060	No protein	-	lncRNA	-	-
ENST00000656743.2	FAM182A-209	1059	No protein	-	lncRNA	-	-
ENST00000657899.1	FAM182A-210	1056	No protein	-	lncRNA	-	-
ENST00000822620.1	FAM182A-283	1044	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822569.1	FAM182A-232	1021	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471057.2	FAM182A-204	1014	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000666563.2	FAM182A-213	983	No protein	-	lncRNA	-	-
ENST00000716749.1	FAM182A-221	974	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822563.1	FAM182A-226	972	No protein	-	lncRNA	-	-
ENST00000822579.1	FAM182A-242	969	No protein	-	lncRNA	-	-
ENST00000822564.1	FAM182A-227	962	No protein	-	lncRNA	-	-
ENST00000669090.2	FAM182A-217	948	No protein	-	lncRNA	-	-
ENST00000822584.1	FAM182A-247	943	No protein	-	lncRNA	-	-
ENST00000663268.2	FAM182A-212	937	No protein	-	lncRNA	-	-
ENST00000822590.1	FAM182A-253	929	No protein	-	lncRNA	-	-
ENST00000389261.5	FAM182A-202	917	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000822565.1	FAM182A-228	916	No protein	-	lncRNA	-	-
ENST00000822624.1	FAM182A-287	912	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822628.1	FAM182A-290	911	No protein	-	lncRNA	-	-
ENST00000822637.1	FAM182A-299	908	No protein	-	lncRNA	-	-
ENST00000653748.2	FAM182A-207	905	No protein	-	lncRNA	-	-
ENST00000822625.1	FAM182A-288	898	No protein	-	lncRNA	-	-
ENST00000822566.1	FAM182A-229	892	No protein	-	lncRNA	-	-
ENST00000822646.1	FAM182A-308	891	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822643.1	FAM182A-305	872	No protein	-	lncRNA	-	-
ENST00000822612.1	FAM182A-275	864	No protein	-	lncRNA	-	-
ENST00000822580.1	FAM182A-243	863	No protein	-	lncRNA	-	-
ENST00000716752.1	FAM182A-224	858	No protein	-	lncRNA	-	-
ENST00000822598.1	FAM182A-261	858	No protein	-	lncRNA	-	-
ENST00000822618.1	FAM182A-281	818	No protein	-	lncRNA	-	-
ENST00000660813.1	FAM182A-211	805	No protein	-	lncRNA	-	-
ENST00000822570.1	FAM182A-233	799	No protein	-	lncRNA	-	-
ENST00000822642.1	FAM182A-304	799	No protein	-	lncRNA	-	-
ENST00000822632.1	FAM182A-294	793	No protein	-	lncRNA	-	-
ENST00000822568.1	FAM182A-231	787	No protein	-	lncRNA	-	-
ENST00000482133.3	FAM182A-205	783	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000822575.1	FAM182A-238	783	No protein	-	lncRNA	-	-
ENST00000822562.1	FAM182A-225	774	No protein	-	lncRNA	-	-
ENST00000822574.1	FAM182A-237	769	No protein	-	lncRNA	-	-
ENST00000822615.1	FAM182A-278	755	No protein	-	lncRNA	-	-
ENST00000670372.1	FAM182A-218	738	No protein	-	lncRNA	-	-
ENST00000822582.1	FAM182A-245	734	No protein	-	lncRNA	-	-
ENST00000822583.1	FAM182A-246	729	No protein	-	lncRNA	-	-
ENST00000822644.1	FAM182A-306	719	No protein	-	lncRNA	-	-
ENST00000716751.1	FAM182A-223	709	No protein	-	lncRNA	-	-
ENST00000822595.1	FAM182A-258	709	No protein	-	lncRNA	-	-
ENST00000822611.1	FAM182A-274	703	No protein	-	lncRNA	-	-
ENST00000822591.1	FAM182A-254	700	No protein	-	lncRNA	-	-
ENST00000822608.1	FAM182A-271	698	No protein	-	lncRNA	-	-
ENST00000822617.1	FAM182A-280	692	No protein	-	lncRNA	-	-
ENST00000822630.1	FAM182A-292	682	No protein	-	lncRNA	-	-
ENST00000822576.1	FAM182A-239	680	No protein	-	lncRNA	-	-
ENST00000822627.1	FAM182A-289	676	No protein	-	lncRNA	-	-
ENST00000822600.1	FAM182A-263	665	No protein	-	lncRNA	-	-
ENST00000822610.1	FAM182A-273	665	No protein	-	lncRNA	-	-
ENST00000822567.1	FAM182A-230	660	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822661.1	FAM182A-319	657	No protein	-	lncRNA	-	-
ENST00000822619.1	FAM182A-282	654	No protein	-	lncRNA	-	-
ENST00000822596.1	FAM182A-259	649	No protein	-	lncRNA	-	-
ENST00000667959.2	FAM182A-215	648	No protein	-	lncRNA	-	-
ENST00000822571.1	FAM182A-234	648	No protein	-	lncRNA	-	-
ENST00000822581.1	FAM182A-244	642	No protein	-	lncRNA	-	-
ENST00000822658.1	FAM182A-316	633	No protein	-	lncRNA	-	-
ENST00000822594.1	FAM182A-257	624	No protein	-	lncRNA	-	-
ENST00000822603.1	FAM182A-266	619	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822613.1	FAM182A-276	619	No protein	-	lncRNA	-	-
ENST00000439881.1	FAM182A-203	614	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000822585.1	FAM182A-248	614	No protein	-	lncRNA	-	-
ENST00000822631.1	FAM182A-293	606	No protein	-	lncRNA	-	-
ENST00000822641.1	FAM182A-303	601	No protein	-	lncRNA	-	-
ENST00000822660.1	FAM182A-318	597	No protein	-	lncRNA	-	-
ENST00000822577.1	FAM182A-240	588	No protein	-	lncRNA	-	-
ENST00000822629.1	FAM182A-291	586	No protein	-	lncRNA	-	-
ENST00000822572.1	FAM182A-235	572	No protein	-	lncRNA	-	-
ENST00000671124.2	FAM182A-220	565	No protein	-	lncRNA	-	-
ENST00000822659.1	FAM182A-317	560	No protein	-	lncRNA	-	-
ENST00000822609.1	FAM182A-272	555	No protein	-	lncRNA	-	-
ENST00000822604.1	FAM182A-267	553	No protein	-	lncRNA	-	-
ENST00000822655.1	FAM182A-313	551	No protein	-	lncRNA	-	-
ENST00000822588.1	FAM182A-251	548	No protein	-	lncRNA	-	-
ENST00000822607.1	FAM182A-270	542	No protein	-	lncRNA	-	-
ENST00000822649.1	FAM182A-311	541	No protein	-	lncRNA	-	-
ENST00000822638.1	FAM182A-300	528	No protein	-	lncRNA	-	-
ENST00000822647.1	FAM182A-309	506	No protein	-	lncRNA	-	-
ENST00000822573.1	FAM182A-236	494	No protein	-	lncRNA	-	-
ENST00000822578.1	FAM182A-241	482	No protein	-	lncRNA	-	-
ENST00000822601.1	FAM182A-264	476	No protein	-	lncRNA	-	-
ENST00000822606.1	FAM182A-269	467	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000822657.1	FAM182A-315	466	No protein	-	lncRNA	-	-
ENST00000822648.1	FAM182A-310	460	No protein	-	lncRNA	-	-
ENST00000822614.1	FAM182A-277	457	No protein	-	lncRNA	-	-
ENST00000822645.1	FAM182A-307	430	No protein	-	lncRNA	-	-
ENST00000822634.1	FAM182A-296	427	No protein	-	lncRNA	-	-
ENST00000822597.1	FAM182A-260	416	No protein	-	lncRNA	-	-
ENST00000822616.1	FAM182A-279	403	No protein	-	lncRNA	-	-
ENST00000822592.1	FAM182A-255	387	No protein	-	lncRNA	-	-
ENST00000822602.1	FAM182A-265	373	No protein	-	lncRNA	-	-
ENST00000822605.1	FAM182A-268	367	No protein	-	lncRNA	-	-
ENST00000822650.1	FAM182A-312	330	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,014 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000471057.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000471057.2 FAM182A-204

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Transcript: ENST00000471057.2 FAM182A-204

Summary

About Us

Get help

Our sister sites

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