Transcript: ENST00000461864.8 NCK1-DT-201

Description

NCK1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:49645]

Gene Synonyms

NCK1-AS1, SLC35G2-AS1

Location

Chromosome 3: 136,841,102-136,862,084 reverse strand.

About this transcript

This transcript has 3 exons and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000239213.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000762151.1	NCK1-DT-211	1759	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666310.1	NCK1-DT-206	2304	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661609.2	NCK1-DT-204	2050	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000470236.2	NCK1-DT-202	1943	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000461864.8	NCK1-DT-201	1865	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000716158.1	NCK1-DT-210	1785	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670711.1	NCK1-DT-209	1611	No protein	-	lncRNA	-	-
ENST00000663856.1	NCK1-DT-205	1420	No protein	-	lncRNA	-	-
ENST00000762162.1	NCK1-DT-222	1401	No protein	-	lncRNA	-	-
ENST00000762154.1	NCK1-DT-214	1374	No protein	-	lncRNA	-	-
ENST00000762155.1	NCK1-DT-215	1335	No protein	-	lncRNA	-	-
ENST00000762152.1	NCK1-DT-212	1302	No protein	-	lncRNA	-	-
ENST00000762153.1	NCK1-DT-213	1252	No protein	-	lncRNA	-	-
ENST00000667524.1	NCK1-DT-208	1124	No protein	-	lncRNA	-	-
ENST00000762167.1	NCK1-DT-227	1105	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762156.1	NCK1-DT-216	1083	No protein	-	lncRNA	-	-
ENST00000474250.6	NCK1-DT-203	1032	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000762169.1	NCK1-DT-229	1000	No protein	-	lncRNA	-	-
ENST00000762166.1	NCK1-DT-226	902	No protein	-	lncRNA	-	-
ENST00000762163.1	NCK1-DT-223	865	No protein	-	lncRNA	-	-
ENST00000762164.1	NCK1-DT-224	759	No protein	-	lncRNA	-	-
ENST00000762157.1	NCK1-DT-217	735	No protein	-	lncRNA	-	-
ENST00000762159.1	NCK1-DT-219	730	No protein	-	lncRNA	-	-
ENST00000762165.1	NCK1-DT-225	708	No protein	-	lncRNA	-	-
ENST00000762158.1	NCK1-DT-218	670	No protein	-	lncRNA	-	-
ENST00000762161.1	NCK1-DT-221	545	No protein	-	lncRNA	-	-
ENST00000666660.1	NCK1-DT-207	518	No protein	-	lncRNA	-	-
ENST00000762160.1	NCK1-DT-220	494	No protein	-	lncRNA	-	-
ENST00000762168.1	NCK1-DT-228	490	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,865 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000461864.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000461864.8 NCK1-DT-201

Summary

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Transcript: ENST00000461864.8 NCK1-DT-201

Summary

About Us

Get help

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