Transcript: ENST00000459855.2

Description

novel transcript

Location

Chromosome 3: 115,239,879-115,285,347 forward strand.

About this transcript

This transcript has 7 exons and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000242880.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000662602.1	-	1021	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000663637.2	-	1985	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842466.1	-	1872	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688581.3	-	1802	No protein	-	lncRNA	-	-
ENST00000661932.1	-	1705	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842467.1	-	1657	No protein	-	lncRNA	-	-
ENST00000737295.1	-	1643	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842476.1	-	1486	No protein	-	lncRNA	-	-
ENST00000667087.2	-	1283	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842468.1	-	1207	No protein	-	lncRNA	-	-
ENST00000842469.1	-	1199	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842461.1	-	1129	No protein	-	lncRNA	-	-
ENST00000653398.1	-	1118	No protein	-	lncRNA	-	-
ENST00000842462.1	-	1118	No protein	-	lncRNA	-	-
ENST00000656753.1	-	1031	No protein	-	lncRNA	-	-
ENST00000842464.1	-	959	No protein	-	lncRNA	-	-
ENST00000842463.1	-	947	No protein	-	lncRNA	-	-
ENST00000459855.2	-	880	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000663677.1	-	873	No protein	-	lncRNA	-	-
ENST00000842470.1	-	821	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000842465.1	-	763	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657371.1	-	754	No protein	-	lncRNA	-	-
ENST00000842472.1	-	689	No protein	-	lncRNA	-	-
ENST00000842475.1	-	668	No protein	-	lncRNA	-	-
ENST00000842474.1	-	542	No protein	-	lncRNA	-	-
ENST00000842471.1	-	532	No protein	-	lncRNA	-	-
ENST00000842477.1	-	528	No protein	-	lncRNA	-	-
ENST00000842473.1	-	514	No protein	-	lncRNA	-	-
ENST00000737297.1	-	461	No protein	-	lncRNA	-	-
ENST00000737296.1	-	363	No protein	-	lncRNA	-	-
ENST00000737298.1	-	294	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 880 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000459855.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000459855.2

Summary

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Transcript: ENST00000459855.2

Summary

About Us

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