Transcript: ENST00000458589.2 PSORS1C2-203

Description

psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]

Gene Synonyms

C6ORF17, SPR1

Location

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 861 variant alleles and maps to 697 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000458589.2	PSORS1C2-203	1152	136aa	ENSP00000414952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SQ83 Q9UIG4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,152 bps, Translation length: 136 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UIG4

Transcript Support Level (TSL)

TSL:1

Version

ENST00000458589.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.