Transcript: ENST00000457451.7 HLA-DRB4-203

Description

major histocompatibility complex, class II, DR beta 4 [Source:HGNC Symbol;Acc:HGNC:4952]

Gene Synonyms

HLA-DR4B

Location

Scaffold HSCHR6_MHC_MCF_CTG1: 3,876,744-3,891,699 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 8 variant alleles and maps to 834 oligo probes.

Gene

This transcript is a product of gene ENSG00000231021.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000457451.7	HLA-DRB4-203	1176	266aa	ENSP00000412031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P13762 X5D2U9	NM_021983.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,176 bps, Translation length: 266 residues

MANE

This MANE Select transcript contains ENSP00000412031 and matches to NM_021983.5 and NP_068818.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13762

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000457451.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000457451.7 HLA-DRB4-203

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Transcript: ENST00000457451.7 HLA-DRB4-203

Summary

About Us

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