Transcript: ENST00000456582.2 CNN3-DT-203

Description

CNN3 divergent transcript [Source:HGNC Symbol;Acc:HGNC:54176]

Gene Synonyms

RP4-639F20.1

Location

Chromosome 1: 94,931,461-94,963,210 forward strand.

About this transcript

This transcript has 3 exons and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000235501.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715651.1	CNN3-DT-211	1505	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000687058.3	CNN3-DT-210	1784	No protein	-	lncRNA	-	-
ENST00000736311.1	CNN3-DT-245	1784	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666627.2	CNN3-DT-209	1678	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000438509.3	CNN3-DT-201	1615	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000659935.2	CNN3-DT-205	1518	No protein	-	lncRNA	-	-
ENST00000664672.1	CNN3-DT-208	1479	No protein	-	lncRNA	-	-
ENST00000659966.2	CNN3-DT-206	1453	No protein	-	lncRNA	-	-
ENST00000736295.1	CNN3-DT-229	1416	No protein	-	lncRNA	-	-
ENST00000657603.2	CNN3-DT-204	1414	No protein	-	lncRNA	-	-
ENST00000736298.1	CNN3-DT-232	1384	No protein	-	lncRNA	-	-
ENST00000736294.1	CNN3-DT-228	1363	No protein	-	lncRNA	-	-
ENST00000664573.1	CNN3-DT-207	1362	No protein	-	lncRNA	-	-
ENST00000736297.1	CNN3-DT-231	1299	No protein	-	lncRNA	-	-
ENST00000736296.1	CNN3-DT-230	1242	No protein	-	lncRNA	-	-
ENST00000736300.1	CNN3-DT-234	1112	No protein	-	lncRNA	-	-
ENST00000715652.1	CNN3-DT-212	1096	No protein	-	lncRNA	-	-
ENST00000736301.1	CNN3-DT-235	1020	No protein	-	lncRNA	-	-
ENST00000736299.1	CNN3-DT-233	1018	No protein	-	lncRNA	-	-
ENST00000736303.1	CNN3-DT-237	954	No protein	-	lncRNA	-	-
ENST00000736284.1	CNN3-DT-218	929	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000736293.1	CNN3-DT-227	906	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000736290.1	CNN3-DT-224	889	No protein	-	lncRNA	-	-
ENST00000736279.1	CNN3-DT-213	883	No protein	-	lncRNA	-	-
ENST00000736291.1	CNN3-DT-225	880	No protein	-	lncRNA	-	-
ENST00000456582.2	CNN3-DT-203	874	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000736280.1	CNN3-DT-214	868	No protein	-	lncRNA	-	-
ENST00000736283.1	CNN3-DT-217	841	No protein	-	lncRNA	-	-
ENST00000736306.1	CNN3-DT-240	772	No protein	-	lncRNA	-	-
ENST00000736312.1	CNN3-DT-246	754	No protein	-	lncRNA	-	-
ENST00000736292.1	CNN3-DT-226	747	No protein	-	lncRNA	-	-
ENST00000736285.1	CNN3-DT-219	725	No protein	-	lncRNA	-	-
ENST00000736305.1	CNN3-DT-239	723	No protein	-	lncRNA	-	-
ENST00000736302.1	CNN3-DT-236	701	No protein	-	lncRNA	-	-
ENST00000736282.1	CNN3-DT-216	698	No protein	-	lncRNA	-	-
ENST00000736281.1	CNN3-DT-215	695	No protein	-	lncRNA	-	-
ENST00000736289.1	CNN3-DT-223	678	No protein	-	lncRNA	-	-
ENST00000736288.1	CNN3-DT-222	624	No protein	-	lncRNA	-	-
ENST00000736287.1	CNN3-DT-221	609	No protein	-	lncRNA	-	-
ENST00000736286.1	CNN3-DT-220	606	No protein	-	lncRNA	-	-
ENST00000736309.1	CNN3-DT-243	597	No protein	-	lncRNA	-	-
ENST00000736307.1	CNN3-DT-241	573	No protein	-	lncRNA	-	-
ENST00000736308.1	CNN3-DT-242	547	No protein	-	lncRNA	-	-
ENST00000736304.1	CNN3-DT-238	537	No protein	-	lncRNA	-	-
ENST00000452846.5	CNN3-DT-202	518	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000736313.1	CNN3-DT-247	478	No protein	-	lncRNA	-	-
ENST00000736310.1	CNN3-DT-244	418	No protein	-	lncRNA	-	-
ENST00000736314.1	CNN3-DT-248	387	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 874 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000456582.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000456582.2 CNN3-DT-203

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Transcript: ENST00000456582.2 CNN3-DT-203

Summary

About Us

Get help

Our sister sites

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