Transcript: ENST00000454681.2

Description

novel transcript

Location

Chromosome 13: 33,355,206-33,676,768 reverse strand.

About this transcript

This transcript has 6 exons and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000230490.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000730869.1	-	1709	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730905.1	-	2481	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730910.1	-	2468	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730902.1	-	2454	No protein	-	lncRNA	-	-
ENST00000730903.1	-	2445	No protein	-	lncRNA	-	-
ENST00000730909.1	-	2409	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730896.1	-	2346	No protein	-	lncRNA	-	-
ENST00000653421.2	-	2298	No protein	-	lncRNA	-	-
ENST00000730901.1	-	2226	No protein	-	lncRNA	-	-
ENST00000730913.1	-	2169	No protein	-	lncRNA	-	-
ENST00000730906.1	-	2163	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655117.3	-	2131	No protein	-	lncRNA	-	-
ENST00000690486.1	-	2075	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730911.1	-	1754	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730874.1	-	1741	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730888.1	-	1710	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730891.1	-	1574	No protein	-	lncRNA	-	-
ENST00000654283.1	-	1560	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730881.1	-	1515	No protein	-	lncRNA	-	-
ENST00000730882.1	-	1506	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730872.1	-	1495	No protein	-	lncRNA	-	-
ENST00000730883.1	-	1483	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730904.1	-	1482	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730892.1	-	1418	No protein	-	lncRNA	-	-
ENST00000730877.1	-	1405	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730870.1	-	1373	No protein	-	lncRNA	-	-
ENST00000730878.1	-	1330	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730889.1	-	1325	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730875.1	-	1315	No protein	-	lncRNA	-	-
ENST00000730871.1	-	1302	No protein	-	lncRNA	-	-
ENST00000730873.1	-	1299	No protein	-	lncRNA	-	-
ENST00000730876.1	-	1297	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730917.1	-	1295	No protein	-	lncRNA	-	-
ENST00000730880.1	-	1267	No protein	-	lncRNA	-	-
ENST00000730914.1	-	1267	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730897.1	-	1232	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730893.1	-	1224	No protein	-	lncRNA	-	-
ENST00000730879.1	-	1220	No protein	-	lncRNA	-	-
ENST00000660048.2	-	1211	No protein	-	lncRNA	-	-
ENST00000730907.1	-	1123	No protein	-	lncRNA	-	-
ENST00000686875.1	-	1116	No protein	-	lncRNA	-	-
ENST00000730894.1	-	975	No protein	-	lncRNA	-	-
ENST00000730887.1	-	958	No protein	-	lncRNA	-	-
ENST00000730898.1	-	905	No protein	-	lncRNA	-	-
ENST00000691350.2	-	893	No protein	-	lncRNA	-	-
ENST00000454681.2	-	892	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000730895.1	-	857	No protein	-	lncRNA	-	-
ENST00000730916.1	-	829	No protein	-	lncRNA	-	-
ENST00000730899.1	-	795	No protein	-	lncRNA	-	-
ENST00000730912.1	-	731	No protein	-	lncRNA	-	-
ENST00000730915.1	-	612	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000730884.1	-	503	No protein	-	lncRNA	-	-
ENST00000730890.1	-	495	No protein	-	lncRNA	-	-
ENST00000730885.1	-	486	No protein	-	lncRNA	-	-
ENST00000730886.1	-	477	No protein	-	lncRNA	-	-
ENST00000445227.1	-	420	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000730900.1	-	395	No protein	-	lncRNA	-	-
ENST00000437698.1	-	355	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000730908.1	-	321	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 892 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000454681.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000454681.2

Summary

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Transcript: ENST00000454681.2

Summary

About Us

Get help

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