Transcript: ENST00000454128.3

Description

novel transcript

Location

Chromosome 21: 14,746,762-14,753,848 reverse strand.

About this transcript

This transcript has 4 exons and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSG00000232884.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000806529.1	-	684	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000435315.4	-	3386	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000655631.1	-	2193	No protein	-	lncRNA	-	-
ENST00000674136.1	-	1923	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685873.2	-	1828	No protein	-	lncRNA	-	-
ENST00000454128.3	-	1780	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000455253.6	-	1724	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000660333.1	-	1542	No protein	-	lncRNA	-	-
ENST00000670675.1	-	1541	No protein	-	lncRNA	-	-
ENST00000806548.1	-	1315	No protein	-	lncRNA	-	-
ENST00000660772.1	-	1261	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806538.1	-	1241	No protein	-	lncRNA	-	-
ENST00000806550.1	-	1098	No protein	-	lncRNA	-	-
ENST00000806539.1	-	1090	No protein	-	lncRNA	-	-
ENST00000806540.1	-	911	No protein	-	lncRNA	-	-
ENST00000806542.1	-	824	No protein	-	lncRNA	-	-
ENST00000806544.1	-	800	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806541.1	-	797	No protein	-	lncRNA	-	-
ENST00000673788.2	-	777	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806536.1	-	775	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806535.1	-	771	No protein	-	lncRNA	-	-
ENST00000806531.1	-	761	No protein	-	lncRNA	-	-
ENST00000658213.1	-	748	No protein	-	lncRNA	-	-
ENST00000665066.2	-	741	No protein	-	lncRNA	-	-
ENST00000654377.1	-	738	No protein	-	lncRNA	-	-
ENST00000806534.1	-	695	No protein	-	lncRNA	-	-
ENST00000806553.1	-	694	No protein	-	lncRNA	-	-
ENST00000700842.1	-	680	No protein	-	lncRNA	-	-
ENST00000661285.1	-	677	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806551.1	-	625	No protein	-	lncRNA	-	-
ENST00000806533.1	-	624	No protein	-	lncRNA	-	-
ENST00000806530.1	-	605	No protein	-	lncRNA	-	-
ENST00000806545.1	-	583	No protein	-	lncRNA	-	-
ENST00000806537.1	-	570	No protein	-	lncRNA	-	-
ENST00000806549.1	-	514	No protein	-	lncRNA	-	-
ENST00000806532.1	-	508	No protein	-	lncRNA	-	-
ENST00000806546.1	-	504	No protein	-	lncRNA	-	-
ENST00000806543.1	-	490	No protein	-	lncRNA	-	-
ENST00000806552.1	-	487	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000806547.1	-	407	No protein	-	lncRNA	-	-
ENST00000806555.1	-	401	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688014.2	-	400	No protein	-	lncRNA	-	-
ENST00000806554.1	-	287	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,780 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000454128.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000454128.3

Summary

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Transcript: ENST00000454128.3

Summary

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