Transcript: ENST00000450544.2 LINC02848-201

Description

long intergenic non-protein coding RNA 2848 [Source:HGNC Symbol;Acc:HGNC:54384]

Location

Chromosome 7: 63,900,814-63,917,997 forward strand.

About this transcript

This transcript has 4 exons and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000226581.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000753464.1	LINC02848-215	628	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000753492.1	LINC02848-243	1759	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753497.1	LINC02848-248	1747	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656125.2	LINC02848-204	1629	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669791.3	LINC02848-210	1523	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656723.2	LINC02848-206	1289	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655394.2	LINC02848-202	1261	No protein	-	lncRNA	-	-
ENST00000691281.2	LINC02848-211	1249	No protein	-	lncRNA	-	-
ENST00000753471.1	LINC02848-222	1204	No protein	-	lncRNA	-	-
ENST00000656711.2	LINC02848-205	1180	No protein	-	lncRNA	-	-
ENST00000753470.1	LINC02848-221	1175	No protein	-	lncRNA	-	-
ENST00000753496.1	LINC02848-247	1158	No protein	-	lncRNA	-	-
ENST00000753494.1	LINC02848-245	1121	No protein	-	lncRNA	-	-
ENST00000753482.1	LINC02848-233	1078	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753468.1	LINC02848-219	1070	No protein	-	lncRNA	-	-
ENST00000753466.1	LINC02848-217	1060	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000753486.1	LINC02848-237	1042	No protein	-	lncRNA	-	-
ENST00000753489.1	LINC02848-240	1041	No protein	-	lncRNA	-	-
ENST00000669412.3	LINC02848-209	1021	No protein	-	lncRNA	-	-
ENST00000753493.1	LINC02848-244	934	No protein	-	lncRNA	-	-
ENST00000692676.2	LINC02848-212	872	No protein	-	lncRNA	-	-
ENST00000753481.1	LINC02848-232	737	No protein	-	lncRNA	-	-
ENST00000753476.1	LINC02848-227	713	No protein	-	lncRNA	-	-
ENST00000753495.1	LINC02848-246	712	No protein	-	lncRNA	-	-
ENST00000753485.1	LINC02848-236	700	No protein	-	lncRNA	-	-
ENST00000753479.1	LINC02848-230	693	No protein	-	lncRNA	-	-
ENST00000701114.2	LINC02848-213	663	No protein	-	lncRNA	-	-
ENST00000753469.1	LINC02848-220	652	No protein	-	lncRNA	-	-
ENST00000450544.2	LINC02848-201	649	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000702549.2	LINC02848-214	646	No protein	-	lncRNA	-	-
ENST00000753478.1	LINC02848-229	624	No protein	-	lncRNA	-	-
ENST00000753480.1	LINC02848-231	623	No protein	-	lncRNA	-	-
ENST00000660806.1	LINC02848-208	619	No protein	-	lncRNA	-	-
ENST00000753488.1	LINC02848-239	600	No protein	-	lncRNA	-	-
ENST00000656045.2	LINC02848-203	599	No protein	-	lncRNA	-	-
ENST00000753487.1	LINC02848-238	595	No protein	-	lncRNA	-	-
ENST00000753475.1	LINC02848-226	547	No protein	-	lncRNA	-	-
ENST00000753483.1	LINC02848-234	543	No protein	-	lncRNA	-	-
ENST00000753484.1	LINC02848-235	519	No protein	-	lncRNA	-	-
ENST00000753477.1	LINC02848-228	508	No protein	-	lncRNA	-	-
ENST00000753474.1	LINC02848-225	495	No protein	-	lncRNA	-	-
ENST00000753465.1	LINC02848-216	493	No protein	-	lncRNA	-	-
ENST00000753491.1	LINC02848-242	492	No protein	-	lncRNA	-	-
ENST00000659774.1	LINC02848-207	484	No protein	-	lncRNA	-	-
ENST00000753467.1	LINC02848-218	479	No protein	-	lncRNA	-	-
ENST00000753490.1	LINC02848-241	433	No protein	-	lncRNA	-	-
ENST00000753473.1	LINC02848-224	429	No protein	-	lncRNA	-	-
ENST00000753472.1	LINC02848-223	406	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 649 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000450544.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000450544.2 LINC02848-201

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Transcript: ENST00000450544.2 LINC02848-201

Summary

About Us

Get help

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