Transcript: ENST00000449847.5 TSBP1-234

Description

testis expressed basic protein 1 [Source:HGNC Symbol;Acc:HGNC:13922]

Gene Synonyms

C6ORF10, TSBP

Location

Scaffold HSCHR6_MHC_COX_CTG1: 3,731,147-3,810,010 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 20 domains and features, is associated with 26452 variant alleles and maps to 1741 oligo probes.

Gene

This transcript is a product of gene ENSG00000234280.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000449847.5	TSBP1-234	2148	563aa	ENSP00000406760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140T9M2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000427082.1	TSBP1-233	2173	562aa	ENSP00000416682.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140T9Y3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,148 bps, Translation length: 563 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000449847.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000449847.5 TSBP1-234

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Transcript: ENST00000449847.5 TSBP1-234

Summary

About Us

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