Transcript: ENST00000449075.4 THORLNC-202

Description

testis associated oncogenic lncRNA [Source:HGNC Symbol;Acc:HGNC:53788]

Gene Synonyms

THOR

Location

Chromosome 2: 118,182,927-118,186,461 reverse strand.

About this transcript

This transcript has 3 exons and maps to 288 oligo probes.

Gene

This transcript is a product of gene ENSG00000226856.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000744784.1	THORLNC-211	632	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669120.3	THORLNC-207	1514	No protein	-	lncRNA	-	-
ENST00000648779.1	THORLNC-205	1350	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744803.1	THORLNC-230	1212	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701291.3	THORLNC-210	1117	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744797.1	THORLNC-224	1096	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744800.1	THORLNC-227	1006	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744810.1	THORLNC-237	961	No protein	-	lncRNA	-	-
ENST00000744789.1	THORLNC-216	952	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744787.1	THORLNC-214	907	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744793.1	THORLNC-220	898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744792.1	THORLNC-219	883	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744785.1	THORLNC-212	867	No protein	-	lncRNA	-	-
ENST00000744791.1	THORLNC-218	864	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000687658.2	THORLNC-208	816	No protein	-	lncRNA	-	-
ENST00000414886.5	THORLNC-201	778	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000744804.1	THORLNC-231	778	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744786.1	THORLNC-213	767	No protein	-	lncRNA	-	-
ENST00000647942.1	THORLNC-204	764	No protein	-	lncRNA	-	-
ENST00000744788.1	THORLNC-215	760	No protein	-	lncRNA	-	-
ENST00000744794.1	THORLNC-221	757	No protein	-	lncRNA	-	-
ENST00000449819.3	THORLNC-203	740	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000744801.1	THORLNC-228	720	No protein	-	lncRNA	-	-
ENST00000744790.1	THORLNC-217	698	No protein	-	lncRNA	-	-
ENST00000688717.2	THORLNC-209	696	No protein	-	lncRNA	-	-
ENST00000744806.1	THORLNC-233	695	No protein	-	lncRNA	-	-
ENST00000744811.1	THORLNC-238	688	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000449075.4	THORLNC-202	680	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000661786.3	THORLNC-206	644	No protein	-	lncRNA	-	-
ENST00000744807.1	THORLNC-234	616	No protein	-	lncRNA	-	-
ENST00000744805.1	THORLNC-232	602	No protein	-	lncRNA	-	-
ENST00000744796.1	THORLNC-223	600	No protein	-	lncRNA	-	-
ENST00000744809.1	THORLNC-236	593	No protein	-	lncRNA	-	-
ENST00000744799.1	THORLNC-226	547	No protein	-	lncRNA	-	-
ENST00000744795.1	THORLNC-222	540	No protein	-	lncRNA	-	-
ENST00000744808.1	THORLNC-235	485	No protein	-	lncRNA	-	-
ENST00000744798.1	THORLNC-225	411	No protein	-	lncRNA	-	-
ENST00000744802.1	THORLNC-229	391	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 680 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000449075.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000449075.4 THORLNC-202

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Transcript: ENST00000449075.4 THORLNC-202

Summary

About Us

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