Human (GRCh38.p14)
Description

structural maintenance of chromosomes 6 [Source:HGNC Symbol;Acc:HGNC:20466]

Gene Synonyms

FLJ22116, SMC6L1

Location
About this transcript

This transcript has 28 exons, is annotated with 22 domains and features, is associated with 38019 variant alleles and maps to 885 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000448223.7SMC6-20752401091aaENSP00000404092.2
 
Protein coding
CCDS1690Q96SB8-1 NM_001142286.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000351948.8SMC6-20151731091aaENSP00000323439.4
 
Protein coding
CCDS1690Q96SB8-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000402989.5SMC6-20337291091aaENSP00000384539.1
 
Protein coding
CCDS1690Q96SB8-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000446852.5SMC6-2062460740aaENSP00000408644.1
 
Protein coding
C9JMN1 -TSL:1CDS 3' incomplete
ENST00000381272.5SMC6-2021803445aaENSP00000370672.5
 
Protein coding
A0A0A0MRY1 -TSL:5CDS 3' incomplete
ENST00000428868.1SMC6-20454457aaENSP00000415352.1
 
Protein coding
C9JEF0 -TSL:4CDS 3' incomplete
ENST00000621152.4SMC6-21050076aaENSP00000480257.1
 
Protein coding
A0A087WWI9 -TSL:3CDS 3' incomplete
ENST00000430591.1SMC6-20548022aaENSP00000412246.1
 
Nonsense mediated decay
H7C3J8 -TSL:5CDS 5' incomplete
ENST00000489535.2SMC6-209550No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000481708.1SMC6-2083897No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 28, Coding exons: 26, Transcript length: 5,240 bps, Translation length: 1,091 residues

MANE

This MANE Select transcript contains ENSP00000404092 and matches to NM_001142286.2 and NP_001135758.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SB8

CCDS

This transcript is a member of the Human CCDS set: CCDS1690

Transcript Support Level (TSL)

TSL:1

Version

ENST00000448223.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.