Transcript: ENST00000447875.5 THRB-210

Description

thyroid hormone receptor beta [Source:HGNC Symbol;Acc:HGNC:11799]

Gene Synonyms

C-ERBA-2, C-ERBA-BETA, ERBA-BETA, ERBA2, GRTH, NR1A2, PRTH, THR1, THRB1, THRB2, THRBETA, THRBETA1, THRBETA2, TRB, TRBETA, TRBETA1

Location

Chromosome 3: 24,152,408-24,494,751 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature and maps to 199 oligo probes.

Gene

This transcript is a product of gene ENSG00000151090.21 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000646209.2	THRB-216	7576	461aa	ENSP00000496686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	NM_001354712.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396671.7	THRB-203	7402	461aa	ENSP00000379904.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000851503.1	THRB-220	6576	461aa	ENSP00000521562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851504.1	THRB-221	6525	461aa	ENSP00000521563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000356447.9	THRB-202	6433	461aa	ENSP00000348827.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000965290.1	THRB-242	5860	461aa	ENSP00000635349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851514.1	THRB-231	5816	461aa	ENSP00000521573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851506.1	THRB-223	5799	461aa	ENSP00000521565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851507.1	THRB-224	5782	461aa	ENSP00000521566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851510.1	THRB-227	5779	461aa	ENSP00000521569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851515.1	THRB-232	5765	461aa	ENSP00000521574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646432.1	THRB-218	5710	461aa	ENSP00000496509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851511.1	THRB-228	5664	461aa	ENSP00000521570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851512.1	THRB-229	5657	461aa	ENSP00000521571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965291.1	THRB-243	5624	461aa	ENSP00000635350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851505.1	THRB-222	5608	461aa	ENSP00000521564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000643772.1	THRB-213	5592	461aa	ENSP00000496029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851516.1	THRB-233	5569	461aa	ENSP00000521575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851508.1	THRB-225	5564	461aa	ENSP00000521567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851509.1	THRB-226	5539	461aa	ENSP00000521568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000645139.1	THRB-215	5499	461aa	ENSP00000493709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000644321.1	THRB-214	5489	461aa	ENSP00000496616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000642307.1	THRB-212	5444	461aa	ENSP00000494618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851513.1	THRB-230	5142	374aa	ENSP00000521572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965293.1	THRB-245	3414	461aa	ENSP00000635352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965301.1	THRB-253	3398	461aa	ENSP00000635360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965292.1	THRB-244	3308	461aa	ENSP00000635351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851524.1	THRB-241	3194	461aa	ENSP00000521583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851519.1	THRB-236	3163	461aa	ENSP00000521578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851518.1	THRB-235	3134	461aa	ENSP00000521577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851517.1	THRB-234	3072	461aa	ENSP00000521576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965302.1	THRB-254	2872	461aa	ENSP00000635361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416420.5	THRB-205	2571	461aa	ENSP00000414444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	P10828-1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000851520.1	THRB-237	2211	461aa	ENSP00000521579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965296.1	THRB-248	2139	461aa	ENSP00000635355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851522.1	THRB-239	2119	461aa	ENSP00000521581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965294.1	THRB-246	1991	404aa	ENSP00000635353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000851521.1	THRB-238	1895	461aa	ENSP00000521580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965300.1	THRB-252	1891	461aa	ENSP00000635359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965297.1	THRB-249	1888	461aa	ENSP00000635356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965298.1	THRB-250	1873	461aa	ENSP00000635357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965299.1	THRB-251	1849	461aa	ENSP00000635358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000965295.1	THRB-247	1736	461aa	ENSP00000635354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2641	A0A024R2I8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000280696.9	THRB-201	1718	476aa	ENSP00000280696.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P10828-2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000851523.1	THRB-240	1458	374aa	ENSP00000521582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413780.5	THRB-204	896	132aa	ENSP00000414100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNQ4	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447875.5	THRB-210	754	122aa	ENSP00000388467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0C4DG57	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453729.6	THRB-211	703	121aa	ENSP00000414910.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KR21	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418247.1	THRB-206	592	63aa	ENSP00000393932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZS5	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447414.5	THRB-209	575	103aa	ENSP00000399573.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTN1	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000431815.5	THRB-208	568	114aa	ENSP00000395362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJM3	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000428492.5	THRB-207	539	67aa	ENSP00000404233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JHC2	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000646966.1	THRB-219	6600	186aa	ENSP00000496095.1	Nonsense mediated decay		A0A2R8YF24	-	-
ENST00000646300.1	THRB-217	596	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 754 bps, Translation length: 122 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000447875.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

alternative 5' UTR [Definitions]

Transcript: ENST00000447875.5 THRB-210

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Transcript: ENST00000447875.5 THRB-210

Summary

About Us

Get help

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