Transcript: ENST00000446964.1 LINC01203-203

Description

long intergenic non-protein coding RNA 1203 [Source:HGNC Symbol;Acc:HGNC:49634]

Location

Chromosome X: 13,377,188-13,403,019 forward strand.

About this transcript

This transcript has 2 exons and maps to 137 oligo probes.

Gene

This transcript is a product of gene ENSG00000226985.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661545.2	LINC01203-216	1984	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000669963.1	LINC01203-222	2775	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655502.1	LINC01203-206	2218	No protein	-	lncRNA	-	-
ENST00000660305.2	LINC01203-213	1674	No protein	-	lncRNA	-	-
ENST00000653729.1	LINC01203-205	1672	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656271.1	LINC01203-208	1541	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656410.1	LINC01203-209	1521	No protein	-	lncRNA	-	-
ENST00000659526.1	LINC01203-212	1512	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456091.2	LINC01203-204	1456	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000665887.1	LINC01203-218	1361	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671651.1	LINC01203-223	1358	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661104.1	LINC01203-214	1265	No protein	-	lncRNA	-	-
ENST00000661464.1	LINC01203-215	1220	No protein	-	lncRNA	-	-
ENST00000661629.1	LINC01203-217	1211	No protein	-	lncRNA	-	-
ENST00000668192.1	LINC01203-221	1205	No protein	-	lncRNA	-	-
ENST00000726123.1	LINC01203-226	1152	No protein	-	lncRNA	-	-
ENST00000726121.1	LINC01203-224	1103	No protein	-	lncRNA	-	-
ENST00000656111.2	LINC01203-207	1028	No protein	-	lncRNA	-	-
ENST00000656979.1	LINC01203-210	940	No protein	-	lncRNA	-	-
ENST00000667532.2	LINC01203-219	937	No protein	-	lncRNA	-	-
ENST00000659191.1	LINC01203-211	926	No protein	-	lncRNA	-	-
ENST00000726122.1	LINC01203-225	923	No protein	-	lncRNA	-	-
ENST00000420403.2	LINC01203-202	804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000726126.1	LINC01203-229	766	No protein	-	lncRNA	-	-
ENST00000726125.1	LINC01203-228	759	No protein	-	lncRNA	-	-
ENST00000667868.1	LINC01203-220	657	No protein	-	lncRNA	-	-
ENST00000726124.1	LINC01203-227	632	No protein	-	lncRNA	-	-
ENST00000726127.1	LINC01203-230	590	No protein	-	lncRNA	-	-
ENST00000419566.5	LINC01203-201	580	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000726129.1	LINC01203-232	542	No protein	-	lncRNA	-	-
ENST00000446964.1	LINC01203-203	453	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000726128.1	LINC01203-231	438	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 453 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000446964.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000446964.1 LINC01203-203

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Transcript: ENST00000446964.1 LINC01203-203

Summary

About Us

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