Transcript: ENST00000446169.3 LINC02779-201

Description

long intergenic non-protein coding RNA 2779 [Source:HGNC Symbol;Acc:HGNC:54299]

Location

Chromosome 1: 220,485,104-220,487,581 reverse strand.

About this transcript

This transcript has 3 exons and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSG00000231529.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000785452.1	LINC02779-202	1000	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785454.1	LINC02779-204	1130	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785464.1	LINC02779-214	969	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446169.3	LINC02779-201	837	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000785458.1	LINC02779-208	744	No protein	-	lncRNA	-	-
ENST00000785453.1	LINC02779-203	695	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785456.1	LINC02779-206	687	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000785460.1	LINC02779-210	661	No protein	-	lncRNA	-	-
ENST00000785461.1	LINC02779-211	635	No protein	-	lncRNA	-	-
ENST00000785459.1	LINC02779-209	630	No protein	-	lncRNA	-	-
ENST00000785455.1	LINC02779-205	606	No protein	-	lncRNA	-	-
ENST00000785457.1	LINC02779-207	604	No protein	-	lncRNA	-	-
ENST00000785463.1	LINC02779-213	587	No protein	-	lncRNA	-	-
ENST00000785466.1	LINC02779-216	586	No protein	-	lncRNA	-	-
ENST00000785462.1	LINC02779-212	575	No protein	-	lncRNA	-	-
ENST00000785465.1	LINC02779-215	532	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 837 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000446169.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000446169.3 LINC02779-201

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Transcript: ENST00000446169.3 LINC02779-201

Summary

About Us

Get help

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