Transcript: ENST00000443633.1 LINC01166-202

Description

long intergenic non-protein coding RNA 1166 [Source:HGNC Symbol;Acc:HGNC:49535]

Location

Chromosome 10: 132,943,967-132,965,289 reverse strand.

About this transcript

This transcript has 2 exons and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000232903.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000814339.1	LINC01166-206	1530	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814350.1	LINC01166-217	2762	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814348.1	LINC01166-215	2724	No protein	-	lncRNA	-	-
ENST00000814349.1	LINC01166-216	2716	No protein	-	lncRNA	-	-
ENST00000443633.1	LINC01166-202	2619	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000814340.1	LINC01166-207	1456	No protein	-	lncRNA	-	-
ENST00000715756.1	LINC01166-205	1199	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814352.1	LINC01166-219	824	No protein	-	lncRNA	-	-
ENST00000814359.1	LINC01166-226	650	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814344.1	LINC01166-211	644	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000814358.1	LINC01166-225	635	No protein	-	lncRNA	-	-
ENST00000423232.2	LINC01166-201	631	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000814366.1	LINC01166-233	614	No protein	-	lncRNA	-	-
ENST00000814357.1	LINC01166-224	591	No protein	-	lncRNA	-	-
ENST00000715755.1	LINC01166-204	559	No protein	-	lncRNA	-	-
ENST00000814364.1	LINC01166-231	549	No protein	-	lncRNA	-	-
ENST00000715754.1	LINC01166-203	540	No protein	-	lncRNA	-	-
ENST00000814356.1	LINC01166-223	495	No protein	-	lncRNA	-	-
ENST00000814361.1	LINC01166-228	484	No protein	-	lncRNA	-	-
ENST00000814365.1	LINC01166-232	476	No protein	-	lncRNA	-	-
ENST00000814360.1	LINC01166-227	464	No protein	-	lncRNA	-	-
ENST00000814362.1	LINC01166-229	454	No protein	-	lncRNA	-	-
ENST00000814354.1	LINC01166-221	447	No protein	-	lncRNA	-	-
ENST00000814351.1	LINC01166-218	440	No protein	-	lncRNA	-	-
ENST00000814341.1	LINC01166-208	423	No protein	-	lncRNA	-	-
ENST00000814346.1	LINC01166-213	400	No protein	-	lncRNA	-	-
ENST00000814342.1	LINC01166-209	398	No protein	-	lncRNA	-	-
ENST00000814353.1	LINC01166-220	391	No protein	-	lncRNA	-	-
ENST00000814343.1	LINC01166-210	384	No protein	-	lncRNA	-	-
ENST00000814355.1	LINC01166-222	337	No protein	-	lncRNA	-	-
ENST00000814345.1	LINC01166-212	328	No protein	-	lncRNA	-	-
ENST00000814363.1	LINC01166-230	325	No protein	-	lncRNA	-	-
ENST00000814347.1	LINC01166-214	317	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,619 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000443633.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000443633.1 LINC01166-202

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Transcript: ENST00000443633.1 LINC01166-202

Summary

About Us

Get help

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