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Human (GRCh38.p14)
Description

integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]

Gene Synonyms

CD49F, ITGA6A, ITGA6B, VLA-6

About this transcript

This transcript has 26 exons, is annotated with 49 domains and features, is associated with 33205 variant alleles and maps to 961 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000684293.1ITGA6-21258161073aaENSP00000508249.1
 
Protein coding
CCDS2249P23229-2 NM_000210.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000442250.6ITGA6-20658031130aaENSP00000406694.1
 
Protein coding
CCDS92897P23229-1 NM_001394928.1MANE Plus ClinicalGENCODE PrimaryGENCODE BasicTSL:5
ENST00000409080.6ITGA6-20256861091aaENSP00000386896.1
 
Protein coding
CCDS46451P23229-3 -GENCODE BasicAPPRIS ALT1TSL:2
ENST00000715295.1ITGA6-2135669977aaENSP00000520448.1
 
Protein coding
A0AAQ5BID9 -GENCODE Basic
ENST00000264107.12ITGA6-20154881058aaENSP00000264107.8
 
Protein coding
CCDS92898A0A8C8KBL6 -GENCODE PrimaryGENCODE BasicTSL:1
ENST00000874110.1ITGA6-21554851049aaENSP00000544169.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000874111.1ITGA6-21653781015aaENSP00000544170.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000953156.1ITGA6-2185293961aaENSP00000623215.1
 
Protein coding
--GENCODE Basic
ENST00000874109.1ITGA6-2145166917aaENSP00000544168.1
 
Protein coding
--GENCODE Basic
ENST00000409532.5ITGA6-2033544954aaENSP00000386614.1
 
Protein coding
CCDS82534P23229-7 -GENCODE BasicTSL:2
ENST00000874112.1ITGA6-21735101029aaENSP00000544171.1
 
Protein coding
--GENCODE Basic
ENST00000458358.5ITGA6-20732611086aaENSP00000394169.1
 
Protein coding
P23229-5 -GENCODE BasicTSL:5
ENST00000412899.5ITGA6-204970231aaENSP00000413470.1
 
Protein coding
C9JXX7 -TSL:1CDS 3' incomplete
ENST00000416789.1ITGA6-205853258aaENSP00000388435.1
 
Protein coding
H7BZ97 -TSL:3CDS 5' incomplete
ENST00000469534.1ITGA6-208581No protein-
 
Retained intron
--TSL:2
ENST00000475302.1ITGA6-210577No protein-
 
Retained intron
--TSL:3
ENST00000497107.1ITGA6-211573No protein-
 
Retained intron
--TSL:2
ENST00000470259.1ITGA6-209365No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,803 bps, Translation length: 1,130 residues

MANE

This MANE Plus Clinical transcript contains ENSP00000406694 and matches to NM_001394928.1 and NP_001381857.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23229

CCDS

This transcript is a member of the Human CCDS set: CCDS92897

Transcript Support Level (TSL)

TSL:5

Version

ENST00000442250.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

CAGE supported TSS [Definitions]

inferred transcript model

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.