Human (GRCh38.p14)
Description

nuclear receptor subfamily 1 group H member 3 [Source:HGNC Symbol;Acc:HGNC:7966]

Gene Synonyms

LXR-A, LXRA, RLD-1

Location
About this transcript

This transcript has 10 exons, is annotated with 47 domains and features, is associated with 4943 variant alleles and maps to 536 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000441012.7NR1H3-2111852447aaENSP00000387946.2
 
Protein coding
CCDS7929Q13133-1 NM_005693.4MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000467728.5NR1H3-2172731447aaENSP00000420656.1
 
Protein coding
CCDS7929Q13133-1 -GENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000896730.1NR1H3-2402155447aaENSP00000566789.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896729.1NR1H3-2391956447aaENSP00000566788.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896728.1NR1H3-2381939447aaENSP00000566787.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000616973.4NR1H3-2351919453aaENSP00000477707.1
 
Protein coding
CCDS73285B4DXU5 -GENCODE BasicTSL:1
ENST00000896726.1NR1H3-2361885447aaENSP00000566785.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000896739.1NR1H3-2491821447aaENSP00000566798.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896741.1NR1H3-2511818447aaENSP00000566800.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896735.1NR1H3-2451809447aaENSP00000566794.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896753.1NR1H3-2631805447aaENSP00000566812.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896744.1NR1H3-2541777447aaENSP00000566803.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896737.1NR1H3-2471758447aaENSP00000566796.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896754.1NR1H3-2641752447aaENSP00000566814.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000896731.1NR1H3-2411748447aaENSP00000566790.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000965462.1NR1H3-2781746447aaENSP00000635521.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000896749.1NR1H3-2591739447aaENSP00000566808.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896727.1NR1H3-2371724447aaENSP00000566786.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896740.1NR1H3-2501711447aaENSP00000566799.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000481889.6NR1H3-2211704466aaENSP00000433271.1
 
Protein coding
E9PLL4 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000896745.1NR1H3-2551696448aaENSP00000566804.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000896757.1NR1H3-2651678447aaENSP00000566816.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896746.1NR1H3-2561670447aaENSP00000566805.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896733.1NR1H3-2431645447aaENSP00000566792.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896734.1NR1H3-2441644447aaENSP00000566793.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000896750.1NR1H3-2601609417aaENSP00000566809.1
 
Protein coding
--GENCODE Basic
ENST00000965458.1NR1H3-2741592387aaENSP00000635517.1
 
Protein coding
CCDS44584--GENCODE Basic
ENST00000965460.1NR1H3-2761592417aaENSP00000635519.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000896732.1NR1H3-2421559447aaENSP00000566791.1
 
Protein coding
CCDS7929F1D8N1 -GENCODE BasicAPPRIS P1
ENST00000932404.1NR1H3-2671544422aaENSP00000602463.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000965461.1NR1H3-2771536387aaENSP00000635520.1
 
Protein coding
CCDS44584--GENCODE PrimaryGENCODE Basic
ENST00000932406.1NR1H3-2691529358aaENSP00000602465.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000896736.1NR1H3-2461511358aaENSP00000566795.1
 
Protein coding
--GENCODE Basic
ENST00000965455.1NR1H3-2711511298aaENSP00000635514.1
 
Protein coding
--GENCODE Basic
ENST00000395397.7NR1H3-2011501402aaENSP00000378793.3
 
Protein coding
CCDS44585Q13133-3 -GENCODE BasicTSL:1
ENST00000896738.1NR1H3-2481498358aaENSP00000566797.1
 
Protein coding
--GENCODE Basic
ENST00000932405.1NR1H3-2681496417aaENSP00000602464.1
 
Protein coding
--GENCODE Basic
ENST00000405853.7NR1H3-2031480387aaENSP00000384745.3
 
Protein coding
CCDS44584Q13133-2 -GENCODE BasicTSL:1
ENST00000896752.1NR1H3-2621456358aaENSP00000566811.1
 
Protein coding
--GENCODE Basic
ENST00000932407.1NR1H3-2701452358aaENSP00000602466.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000965456.1NR1H3-2721448358aaENSP00000635515.1
 
Protein coding
--GENCODE Basic
ENST00000896751.1NR1H3-2611428358aaENSP00000566810.1
 
Protein coding
--GENCODE Basic
ENST00000896742.1NR1H3-2521424358aaENSP00000566801.1
 
Protein coding
--GENCODE Basic
ENST00000965457.1NR1H3-2731389387aaENSP00000635516.1
 
Protein coding
CCDS44584--GENCODE Basic
ENST00000405576.5NR1H3-2021352342aaENSP00000385073.1
 
Protein coding
CCDS86200B5MBY7 -GENCODE BasicTSL:5
ENST00000407404.5NR1H3-2041330387aaENSP00000385801.1
 
Protein coding
CCDS44584Q13133-2 -GENCODE BasicTSL:5
ENST00000896743.1NR1H3-2531246298aaENSP00000566802.1
 
Protein coding
--GENCODE Basic
ENST00000896759.1NR1H3-2661166284aaENSP00000566818.1
 
Protein coding
--GENCODE Basic
ENST00000965459.1NR1H3-2751110298aaENSP00000635518.1
 
Protein coding
--GENCODE Basic
ENST00000896747.1NR1H3-2571096295aaENSP00000566806.1
 
Protein coding
--GENCODE Basic
ENST00000527949.1NR1H3-2301065296aaENSP00000432073.1
 
Protein coding
E9PID2 -GENCODE PrimaryGENCODE BasicTSL:2
ENST00000896748.1NR1H3-258924195aaENSP00000566807.1
 
Protein coding
--GENCODE Basic
ENST00000436029.5NR1H3-208911212aaENSP00000403696.1
 
Protein coding
C9JBS2 -TSL:5CDS 3' incomplete
ENST00000449369.5NR1H3-213825205aaENSP00000415591.1
 
Protein coding
C9JCS0 -TSL:5CDS 3' incomplete
ENST00000436778.5NR1H3-209802202aaENSP00000403798.1
 
Protein coding
C9JJ16 -TSL:3CDS 3' incomplete
ENST00000444396.5NR1H3-212784193aaENSP00000391005.1
 
Protein coding
C9J4R0 -TSL:3CDS 3' incomplete
ENST00000531660.5NR1H3-233667167aaENSP00000434650.1
 
Protein coding
E9PPA1 -TSL:3CDS 3' incomplete
ENST00000412937.5NR1H3-205574134aaENSP00000412636.1
 
Protein coding
C9J2C8 -TSL:4CDS 3' incomplete
ENST00000457932.5NR1H3-21455277aaENSP00000413095.1
 
Protein coding
C9JTS4 -TSL:5CDS 3' incomplete
ENST00000437276.1NR1H3-21044068aaENSP00000396132.1
 
Protein coding
C9JEC2 -TSL:3CDS 3' incomplete
ENST00000420369.5NR1H3-207780114aaENSP00000406692.1
 
Nonsense mediated decay
F8WC63 -TSL:3
ENST00000419652.5NR1H3-20655554aaENSP00000407716.1
 
Nonsense mediated decay
F8WEY6 -TSL:4
ENST00000529540.5NR1H3-2311673No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000527464.5NR1H3-2291183No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000461778.5NR1H3-215726No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525441.5NR1H3-228610No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000476086.6NR1H3-219588No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000495866.5NR1H3-226569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000532630.1NR1H3-234549No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000473222.1NR1H3-218549No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000530310.1NR1H3-232542No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000481020.5NR1H3-2201704No protein-
 
Retained intron
--TSL:5
ENST00000487913.5NR1H3-224852No protein-
 
Retained intron
--TSL:2
ENST00000462051.5NR1H3-216706No protein-
 
Retained intron
--TSL:2
ENST00000483882.1NR1H3-222572No protein-
 
Retained intron
--TSL:2
ENST00000498548.1NR1H3-227559No protein-
 
Retained intron
--TSL:3
ENST00000486991.1NR1H3-223539No protein-
 
Retained intron
--TSL:4
ENST00000494018.1NR1H3-225510No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,852 bps, Translation length: 447 residues

MANE

This MANE Select transcript contains ENSP00000387946 and matches to NM_005693.4 and NP_005684.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13133

CCDS

This transcript is a member of the Human CCDS set: CCDS7929

Transcript Support Level (TSL)

TSL:1

Version

ENST00000441012.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.