Transcript: ENST00000440744.2

Description

novel transcript

Location

Chromosome 7: 136,025,761-136,084,668 forward strand.

About this transcript

This transcript has 4 exons and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000232053.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000720838.1	-	593	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000720848.1	-	2228	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000720839.1	-	2188	No protein	-	lncRNA	-	-
ENST00000720843.1	-	2147	No protein	-	lncRNA	-	-
ENST00000720846.1	-	2141	No protein	-	lncRNA	-	-
ENST00000720849.1	-	2086	No protein	-	lncRNA	-	-
ENST00000720840.1	-	2028	No protein	-	lncRNA	-	-
ENST00000720851.1	-	2027	No protein	-	lncRNA	-	-
ENST00000720847.1	-	1954	No protein	-	lncRNA	-	-
ENST00000720842.1	-	1948	No protein	-	lncRNA	-	-
ENST00000720841.1	-	1846	No protein	-	lncRNA	-	-
ENST00000659747.1	-	1792	No protein	-	lncRNA	-	-
ENST00000720844.1	-	1740	No protein	-	lncRNA	-	-
ENST00000720853.1	-	1734	No protein	-	lncRNA	-	-
ENST00000668896.1	-	1550	No protein	-	lncRNA	-	-
ENST00000668062.1	-	1186	No protein	-	lncRNA	-	-
ENST00000657485.1	-	1157	No protein	-	lncRNA	-	-
ENST00000720855.1	-	1093	No protein	-	lncRNA	-	-
ENST00000668668.1	-	1091	No protein	-	lncRNA	-	-
ENST00000721223.1	-	1011	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657456.1	-	980	No protein	-	lncRNA	-	-
ENST00000687312.2	-	909	No protein	-	lncRNA	-	-
ENST00000445293.6	-	889	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000435996.1	-	733	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670875.1	-	730	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000721224.1	-	728	No protein	-	lncRNA	-	-
ENST00000720852.1	-	685	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000720850.1	-	673	No protein	-	lncRNA	-	-
ENST00000720854.1	-	545	No protein	-	lncRNA	-	-
ENST00000721033.1	-	529	No protein	-	lncRNA	-	-
ENST00000720845.1	-	508	No protein	-	lncRNA	-	-
ENST00000656605.1	-	506	No protein	-	lncRNA	-	-
ENST00000454735.1	-	485	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000720856.1	-	467	No protein	-	lncRNA	-	-
ENST00000440744.2	-	455	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000437569.1	-	385	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 455 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000440744.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

Transcript: ENST00000440744.2

Summary

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Transcript: ENST00000440744.2

Summary

About Us

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