Transcript: ENST00000438911.6 TMEM276-ZFTRAF1-201

Description

TMEM276-ZFTRAF1 readthrough [Source:HGNC Symbol;Acc:HGNC:56752]

Location

Chromosome 8: 144,449,582-144,465,035 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 9934 variant alleles and maps to 289 oligo probes.

Gene

This transcript is a product of gene ENSG00000291316.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000438911.6	TMEM276-ZFTRAF1-201	2020	362aa	ENSP00000387426.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47943	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000526887.5	TMEM276-ZFTRAF1-202	1012	246aa	ENSP00000434470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ42	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,020 bps, Translation length: 362 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47943

Transcript Support Level (TSL)

TSL:2

Version

ENST00000438911.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000438911.6 TMEM276-ZFTRAF1-201

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Transcript: ENST00000438911.6 TMEM276-ZFTRAF1-201

Summary

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