Transcript: ENST00000437416.3 CNIH3-AS2-201

Description

CNIH3 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:41162]

Location

Chromosome 1: 224,608,130-224,616,220 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 3059 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000233384.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000437416.3	CNIH3-AS2-201	3958	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663810.2	CNIH3-AS2-203	3514	No protein	-	lncRNA	-	-
ENST00000657834.2	CNIH3-AS2-202	1299	No protein	-	lncRNA	-	-
ENST00000784742.1	CNIH3-AS2-205	809	No protein	-	lncRNA	-	-
ENST00000784747.1	CNIH3-AS2-210	760	No protein	-	lncRNA	-	-
ENST00000784745.1	CNIH3-AS2-208	745	No protein	-	lncRNA	-	-
ENST00000784751.1	CNIH3-AS2-214	600	No protein	-	lncRNA	-	-
ENST00000784743.1	CNIH3-AS2-206	584	No protein	-	lncRNA	-	-
ENST00000784749.1	CNIH3-AS2-212	558	No protein	-	lncRNA	-	-
ENST00000784750.1	CNIH3-AS2-213	500	No protein	-	lncRNA	-	-
ENST00000784746.1	CNIH3-AS2-209	454	No protein	-	lncRNA	-	-
ENST00000784748.1	CNIH3-AS2-211	442	No protein	-	lncRNA	-	-
ENST00000784744.1	CNIH3-AS2-207	351	No protein	-	lncRNA	-	-
ENST00000784741.1	CNIH3-AS2-204	232	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,958 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000437416.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000437416.3 CNIH3-AS2-201

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Transcript: ENST00000437416.3 CNIH3-AS2-201

Summary

About Us

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