Transcript: ENST00000435574.2 LINC01354-202

Description

long intergenic non-protein coding RNA 1354 [Source:HGNC Symbol;Acc:HGNC:50581]

Location

About this transcript

This transcript has 3 exons, is associated with 1684 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000653353.1	LINC01354-204	2887	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000663964.1	LINC01354-205	3225	No protein	-	lncRNA	-	-
ENST00000665108.2	LINC01354-206	3217	No protein	-	lncRNA	-	-
ENST00000435574.2	LINC01354-202	2877	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000653099.1	LINC01354-203	2851	No protein	-	lncRNA	-	-
ENST00000421207.2	LINC01354-201	1295	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,877 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000435574.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.