Transcript: ENST00000431761.1

Description

novel transcript

Location

Chromosome 16: 31,705,670-31,707,351 forward strand.

About this transcript

This transcript has 4 exons and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSG00000290927.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000411844.2	-	2426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000686087.2	-	1798	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000562354.2	-	4117	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000824214.1	-	2658	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824195.1	-	2483	No protein	-	lncRNA	-	-
ENST00000824202.1	-	2334	No protein	-	lncRNA	-	-
ENST00000824204.1	-	2325	No protein	-	lncRNA	-	-
ENST00000824207.1	-	2227	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000824218.1	-	2001	No protein	-	lncRNA	-	-
ENST00000824190.1	-	1991	No protein	-	lncRNA	-	-
ENST00000824185.1	-	1876	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000254109.11	-	1866	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000824187.1	-	1866	No protein	-	lncRNA	-	-
ENST00000824189.1	-	1826	No protein	-	lncRNA	-	-
ENST00000693004.2	-	1816	No protein	-	lncRNA	-	-
ENST00000824212.1	-	1763	No protein	-	lncRNA	-	-
ENST00000824211.1	-	1758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689776.2	-	1745	No protein	-	lncRNA	-	-
ENST00000824219.1	-	1733	No protein	-	lncRNA	-	-
ENST00000824181.1	-	1729	No protein	-	lncRNA	-	-
ENST00000692346.1	-	1718	No protein	-	lncRNA	-	-
ENST00000692505.2	-	1670	No protein	-	lncRNA	-	-
ENST00000824215.1	-	1641	No protein	-	lncRNA	-	-
ENST00000532304.7	-	1639	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000824186.1	-	1625	No protein	-	lncRNA	-	-
ENST00000824194.1	-	1616	No protein	-	lncRNA	-	-
ENST00000687897.1	-	1611	No protein	-	lncRNA	-	-
ENST00000824208.1	-	1610	No protein	-	lncRNA	-	-
ENST00000686901.1	-	1606	No protein	-	lncRNA	-	-
ENST00000824180.1	-	1603	No protein	-	lncRNA	-	-
ENST00000824188.1	-	1594	No protein	-	lncRNA	-	-
ENST00000824184.1	-	1592	No protein	-	lncRNA	-	-
ENST00000824193.1	-	1559	No protein	-	lncRNA	-	-
ENST00000824222.1	-	1550	No protein	-	lncRNA	-	-
ENST00000824206.1	-	1549	No protein	-	lncRNA	-	-
ENST00000824216.1	-	1549	No protein	-	lncRNA	-	-
ENST00000824210.1	-	1545	No protein	-	lncRNA	-	-
ENST00000685223.2	-	1527	No protein	-	lncRNA	-	-
ENST00000525610.7	-	1497	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000824205.1	-	1496	No protein	-	lncRNA	-	-
ENST00000690479.1	-	1494	No protein	-	lncRNA	-	-
ENST00000824177.1	-	1481	No protein	-	lncRNA	-	-
ENST00000824213.1	-	1481	No protein	-	lncRNA	-	-
ENST00000688517.2	-	1477	No protein	-	lncRNA	-	-
ENST00000684847.1	-	1476	No protein	-	lncRNA	-	-
ENST00000824217.1	-	1468	No protein	-	lncRNA	-	-
ENST00000824209.1	-	1467	No protein	-	lncRNA	-	-
ENST00000824199.1	-	1465	No protein	-	lncRNA	-	-
ENST00000824203.1	-	1464	No protein	-	lncRNA	-	-
ENST00000824178.1	-	1453	No protein	-	lncRNA	-	-
ENST00000717417.1	-	1441	No protein	-	lncRNA	-	-
ENST00000824221.1	-	1428	No protein	-	lncRNA	-	-
ENST00000824201.1	-	1393	No protein	-	lncRNA	-	-
ENST00000691836.1	-	1368	No protein	-	lncRNA	-	-
ENST00000687555.2	-	1361	No protein	-	lncRNA	-	-
ENST00000824197.1	-	1361	No protein	-	lncRNA	-	-
ENST00000824196.1	-	1357	No protein	-	lncRNA	-	-
ENST00000824198.1	-	1356	No protein	-	lncRNA	-	-
ENST00000824182.1	-	1350	No protein	-	lncRNA	-	-
ENST00000824191.1	-	1326	No protein	-	lncRNA	-	-
ENST00000824179.1	-	1241	No protein	-	lncRNA	-	-
ENST00000691015.1	-	1235	No protein	-	lncRNA	-	-
ENST00000824200.1	-	1210	No protein	-	lncRNA	-	-
ENST00000824225.1	-	1186	No protein	-	lncRNA	-	-
ENST00000824192.1	-	1088	No protein	-	lncRNA	-	-
ENST00000824183.1	-	934	No protein	-	lncRNA	-	-
ENST00000824226.1	-	874	No protein	-	lncRNA	-	-
ENST00000824228.1	-	804	No protein	-	lncRNA	-	-
ENST00000824220.1	-	761	No protein	-	lncRNA	-	-
ENST00000824227.1	-	760	No protein	-	lncRNA	-	-
ENST00000431761.1	-	723	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000824224.1	-	568	No protein	-	lncRNA	-	-
ENST00000824223.1	-	424	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 723 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000431761.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000431761.1

Summary

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Transcript: ENST00000431761.1

Summary

About Us

Get help

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