Transcript: ENST00000430983.6 AMZ2P1-203

Description

AMZ2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:26491]

Gene Synonyms

FLJ32065

Location

Chromosome 17: 64,966,550-64,975,573 reverse strand.

About this transcript

This transcript has 5 exons and maps to 713 oligo probes.

Gene

This transcript is a product of gene ENSG00000291140.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000813184.1	AMZ2P1-221	2885	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000430983.6	AMZ2P1-203	3430	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000397713.6	AMZ2P1-202	2260	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000813197.1	AMZ2P1-234	1953	No protein	-	lncRNA	-	-
ENST00000813206.1	AMZ2P1-243	1844	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000813200.1	AMZ2P1-237	1635	No protein	-	lncRNA	-	-
ENST00000687667.3	AMZ2P1-208	1633	No protein	-	lncRNA	-	-
ENST00000685100.2	AMZ2P1-205	1562	No protein	-	lncRNA	-	-
ENST00000813202.1	AMZ2P1-239	1544	No protein	-	lncRNA	-	-
ENST00000813205.1	AMZ2P1-242	1474	No protein	-	lncRNA	-	-
ENST00000813208.1	AMZ2P1-245	1393	No protein	-	lncRNA	-	-
ENST00000813201.1	AMZ2P1-238	1369	No protein	-	lncRNA	-	-
ENST00000684992.1	AMZ2P1-204	1357	No protein	-	lncRNA	-	-
ENST00000813193.1	AMZ2P1-230	1343	No protein	-	lncRNA	-	-
ENST00000813207.1	AMZ2P1-244	1331	No protein	-	lncRNA	-	-
ENST00000813196.1	AMZ2P1-233	1277	No protein	-	lncRNA	-	-
ENST00000686520.2	AMZ2P1-206	1257	No protein	-	lncRNA	-	-
ENST00000813188.1	AMZ2P1-225	1201	No protein	-	lncRNA	-	-
ENST00000813195.1	AMZ2P1-232	1194	No protein	-	lncRNA	-	-
ENST00000690225.3	AMZ2P1-211	1148	No protein	-	lncRNA	-	-
ENST00000693419.3	AMZ2P1-217	1086	No protein	-	lncRNA	-	-
ENST00000686661.2	AMZ2P1-207	1082	No protein	-	lncRNA	-	-
ENST00000702892.2	AMZ2P1-220	1065	No protein	-	lncRNA	-	-
ENST00000813198.1	AMZ2P1-235	1061	No protein	-	lncRNA	-	-
ENST00000813203.1	AMZ2P1-240	1051	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690715.3	AMZ2P1-214	1045	No protein	-	lncRNA	-	-
ENST00000813194.1	AMZ2P1-231	1019	No protein	-	lncRNA	-	-
ENST00000813209.1	AMZ2P1-246	1017	No protein	-	lncRNA	-	-
ENST00000691709.3	AMZ2P1-216	1003	No protein	-	lncRNA	-	-
ENST00000813189.1	AMZ2P1-226	950	No protein	-	lncRNA	-	-
ENST00000690613.2	AMZ2P1-213	933	No protein	-	lncRNA	-	-
ENST00000702522.1	AMZ2P1-218	910	No protein	-	lncRNA	-	-
ENST00000702644.1	AMZ2P1-219	899	No protein	-	lncRNA	-	-
ENST00000688372.2	AMZ2P1-209	885	No protein	-	lncRNA	-	-
ENST00000813199.1	AMZ2P1-236	881	No protein	-	lncRNA	-	-
ENST00000813185.1	AMZ2P1-222	828	No protein	-	lncRNA	-	-
ENST00000813204.1	AMZ2P1-241	803	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000813192.1	AMZ2P1-229	798	No protein	-	lncRNA	-	-
ENST00000813187.1	AMZ2P1-224	797	No protein	-	lncRNA	-	-
ENST00000689168.3	AMZ2P1-210	788	No protein	-	lncRNA	-	-
ENST00000691343.3	AMZ2P1-215	737	No protein	-	lncRNA	-	-
ENST00000690232.1	AMZ2P1-212	731	No protein	-	lncRNA	-	-
ENST00000813191.1	AMZ2P1-228	661	No protein	-	lncRNA	-	-
ENST00000813186.1	AMZ2P1-223	540	No protein	-	lncRNA	-	-
ENST00000813190.1	AMZ2P1-227	385	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 3,430 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000430983.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000430983.6 AMZ2P1-203

Summary

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Transcript: ENST00000430983.6 AMZ2P1-203

Summary

About Us

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