Transcript: ENST00000425033.1 TSBP1-AS1-203

Description

TSBP1 and BTNL2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39756]

Gene Synonyms

XXBAC-BPG154L12.4

Location

Chromosome 6: 32,255,711-32,265,838 forward strand.

About this transcript

This transcript has 2 exons and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000225914.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000645134.1	TSBP1-AS1-208	2502	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000646176.2	TSBP1-AS1-211	3713	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425033.1	TSBP1-AS1-203	3458	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000645563.1	TSBP1-AS1-210	3297	No protein	-	lncRNA	-	-
ENST00000642577.1	TSBP1-AS1-206	2583	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653922.2	TSBP1-AS1-217	2301	No protein	-	lncRNA	-	-
ENST00000647036.1	TSBP1-AS1-214	2281	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653523.3	TSBP1-AS1-216	2246	No protein	-	lncRNA	-	-
ENST00000644884.2	TSBP1-AS1-207	2223	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000732381.1	TSBP1-AS1-221	2133	No protein	-	lncRNA	-	-
ENST00000653107.2	TSBP1-AS1-215	2116	No protein	-	lncRNA	-	-
ENST00000646628.1	TSBP1-AS1-213	1853	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685706.2	TSBP1-AS1-218	1763	No protein	-	lncRNA	-	-
ENST00000690046.2	TSBP1-AS1-219	1686	No protein	-	lncRNA	-	-
ENST00000645167.1	TSBP1-AS1-209	1681	No protein	-	lncRNA	-	-
ENST00000732382.1	TSBP1-AS1-222	1468	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000732396.1	TSBP1-AS1-236	1243	No protein	-	lncRNA	-	-
ENST00000732390.1	TSBP1-AS1-230	1236	No protein	-	lncRNA	-	-
ENST00000732388.1	TSBP1-AS1-228	1227	No protein	-	lncRNA	-	-
ENST00000732395.1	TSBP1-AS1-235	1214	No protein	-	lncRNA	-	-
ENST00000732397.1	TSBP1-AS1-237	1207	No protein	-	lncRNA	-	-
ENST00000732398.1	TSBP1-AS1-238	1207	No protein	-	lncRNA	-	-
ENST00000732384.1	TSBP1-AS1-224	1137	No protein	-	lncRNA	-	-
ENST00000732405.1	TSBP1-AS1-245	1137	No protein	-	lncRNA	-	-
ENST00000732394.1	TSBP1-AS1-234	1133	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000732387.1	TSBP1-AS1-227	1119	No protein	-	lncRNA	-	-
ENST00000732389.1	TSBP1-AS1-229	1092	No protein	-	lncRNA	-	-
ENST00000732383.1	TSBP1-AS1-223	1050	No protein	-	lncRNA	-	-
ENST00000732385.1	TSBP1-AS1-225	1034	No protein	-	lncRNA	-	-
ENST00000732399.1	TSBP1-AS1-239	1008	No protein	-	lncRNA	-	-
ENST00000732401.1	TSBP1-AS1-241	980	No protein	-	lncRNA	-	-
ENST00000700993.1	TSBP1-AS1-220	974	No protein	-	lncRNA	-	-
ENST00000732391.1	TSBP1-AS1-231	958	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000646550.1	TSBP1-AS1-212	899	No protein	-	lncRNA	-	-
ENST00000732409.1	TSBP1-AS1-249	878	No protein	-	lncRNA	-	-
ENST00000732412.1	TSBP1-AS1-252	875	No protein	-	lncRNA	-	-
ENST00000732402.1	TSBP1-AS1-242	752	No protein	-	lncRNA	-	-
ENST00000732404.1	TSBP1-AS1-244	737	No protein	-	lncRNA	-	-
ENST00000732393.1	TSBP1-AS1-233	729	No protein	-	lncRNA	-	-
ENST00000611838.1	TSBP1-AS1-205	659	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000732407.1	TSBP1-AS1-247	652	No protein	-	lncRNA	-	-
ENST00000426643.1	TSBP1-AS1-204	610	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000732386.1	TSBP1-AS1-226	605	No protein	-	lncRNA	-	-
ENST00000732400.1	TSBP1-AS1-240	579	No protein	-	lncRNA	-	-
ENST00000732411.1	TSBP1-AS1-251	572	No protein	-	lncRNA	-	-
ENST00000732403.1	TSBP1-AS1-243	554	No protein	-	lncRNA	-	-
ENST00000732392.1	TSBP1-AS1-232	530	No protein	-	lncRNA	-	-
ENST00000732408.1	TSBP1-AS1-248	501	No protein	-	lncRNA	-	-
ENST00000732406.1	TSBP1-AS1-246	485	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000732410.1	TSBP1-AS1-250	323	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,458 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000425033.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000425033.1 TSBP1-AS1-203

Summary

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Transcript: ENST00000425033.1 TSBP1-AS1-203

Summary

About Us

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