Transcript: ENST00000423858.5 TSBP1-235

Description

testis expressed basic protein 1 [Source:HGNC Symbol;Acc:HGNC:13922]

Gene Synonyms

C6ORF10, TSBP

Location

Scaffold HSCHR6_MHC_APD_CTG1: 3,648,978-3,704,153 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 10 domains and features and maps to 1238 oligo probes.

Gene

This transcript is a product of gene ENSG00000236672.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000425722.1	TSBP1-236	753	193aa	ENSP00000390018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JHK2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423858.5	TSBP1-235	778	192aa	ENSP00000414408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JK66	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 778 bps, Translation length: 192 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000423858.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000423858.5 TSBP1-235

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Transcript: ENST00000423858.5 TSBP1-235

Summary

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