Transcript: ENST00000423504.2 LINC02828-201

Description

long intergenic non-protein coding RNA 2828 [Source:HGNC Symbol;Acc:HGNC:54359]

Location

About this transcript

This transcript has 3 exons, is associated with 3740 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000665572.1	LINC02828-203	813	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000668439.1	LINC02828-204	634	No protein	-	lncRNA	-	-
ENST00000423504.2	LINC02828-201	599	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000453179.1	LINC02828-202	555	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 599 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000423504.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.