Transcript: ENST00000422294.5 LINC01118-203

Description

long intergenic non-protein coding RNA 1118 [Source:HGNC Symbol;Acc:HGNC:49261]

Location

Chromosome 2: 46,816,571-46,859,013 forward strand.

About this transcript

This transcript has 3 exons and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000222005.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000650611.2	LINC01118-208	1992	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653090.2	LINC01118-209	2473	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468141.2	LINC01118-204	2157	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000759485.1	LINC01118-321	2030	No protein	-	lncRNA	-	-
ENST00000759090.1	LINC01118-225	1810	No protein	-	lncRNA	-	-
ENST00000759483.1	LINC01118-319	1746	No protein	-	lncRNA	-	-
ENST00000759465.1	LINC01118-301	1731	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759124.1	LINC01118-259	1723	No protein	-	lncRNA	-	-
ENST00000759484.1	LINC01118-320	1706	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759102.1	LINC01118-237	1675	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759164.1	LINC01118-299	1666	No protein	-	lncRNA	-	-
ENST00000759098.1	LINC01118-233	1640	No protein	-	lncRNA	-	-
ENST00000759111.1	LINC01118-246	1624	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759118.1	LINC01118-253	1607	No protein	-	lncRNA	-	-
ENST00000479311.1	LINC01118-205	1588	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000759479.1	LINC01118-315	1582	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759482.1	LINC01118-318	1568	No protein	-	lncRNA	-	-
ENST00000759093.1	LINC01118-228	1512	No protein	-	lncRNA	-	-
ENST00000759154.1	LINC01118-289	1509	No protein	-	lncRNA	-	-
ENST00000759125.1	LINC01118-260	1508	No protein	-	lncRNA	-	-
ENST00000759114.1	LINC01118-249	1496	No protein	-	lncRNA	-	-
ENST00000759087.1	LINC01118-222	1494	No protein	-	lncRNA	-	-
ENST00000759097.1	LINC01118-232	1471	No protein	-	lncRNA	-	-
ENST00000759092.1	LINC01118-227	1454	No protein	-	lncRNA	-	-
ENST00000759088.1	LINC01118-223	1450	No protein	-	lncRNA	-	-
ENST00000759110.1	LINC01118-245	1445	No protein	-	lncRNA	-	-
ENST00000759096.1	LINC01118-231	1441	No protein	-	lncRNA	-	-
ENST00000759123.1	LINC01118-258	1441	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759105.1	LINC01118-240	1436	No protein	-	lncRNA	-	-
ENST00000759135.1	LINC01118-270	1428	No protein	-	lncRNA	-	-
ENST00000759117.1	LINC01118-252	1424	No protein	-	lncRNA	-	-
ENST00000759094.1	LINC01118-229	1421	No protein	-	lncRNA	-	-
ENST00000759115.1	LINC01118-250	1419	No protein	-	lncRNA	-	-
ENST00000759108.1	LINC01118-243	1410	No protein	-	lncRNA	-	-
ENST00000759126.1	LINC01118-261	1408	No protein	-	lncRNA	-	-
ENST00000759103.1	LINC01118-238	1404	No protein	-	lncRNA	-	-
ENST00000759100.1	LINC01118-235	1403	No protein	-	lncRNA	-	-
ENST00000759101.1	LINC01118-236	1401	No protein	-	lncRNA	-	-
ENST00000759091.1	LINC01118-226	1393	No protein	-	lncRNA	-	-
ENST00000759095.1	LINC01118-230	1385	No protein	-	lncRNA	-	-
ENST00000759119.1	LINC01118-254	1379	No protein	-	lncRNA	-	-
ENST00000759106.1	LINC01118-241	1376	No protein	-	lncRNA	-	-
ENST00000759099.1	LINC01118-234	1369	No protein	-	lncRNA	-	-
ENST00000759116.1	LINC01118-251	1369	No protein	-	lncRNA	-	-
ENST00000759122.1	LINC01118-257	1369	No protein	-	lncRNA	-	-
ENST00000759469.1	LINC01118-305	1365	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759128.1	LINC01118-263	1364	No protein	-	lncRNA	-	-
ENST00000759104.1	LINC01118-239	1356	No protein	-	lncRNA	-	-
ENST00000759112.1	LINC01118-247	1352	No protein	-	lncRNA	-	-
ENST00000759151.1	LINC01118-286	1351	No protein	-	lncRNA	-	-
ENST00000759113.1	LINC01118-248	1346	No protein	-	lncRNA	-	-
ENST00000759085.1	LINC01118-220	1344	No protein	-	lncRNA	-	-
ENST00000422294.5	LINC01118-203	1338	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000759086.1	LINC01118-221	1338	No protein	-	lncRNA	-	-
ENST00000759109.1	LINC01118-244	1329	No protein	-	lncRNA	-	-
ENST00000759107.1	LINC01118-242	1324	No protein	-	lncRNA	-	-
ENST00000759143.1	LINC01118-278	1312	No protein	-	lncRNA	-	-
ENST00000759157.1	LINC01118-292	1309	No protein	-	lncRNA	-	-
ENST00000759089.1	LINC01118-224	1306	No protein	-	lncRNA	-	-
ENST00000490950.6	LINC01118-206	1300	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000759478.1	LINC01118-314	1295	No protein	-	lncRNA	-	-
ENST00000759084.1	LINC01118-219	1293	No protein	-	lncRNA	-	-
ENST00000759134.1	LINC01118-269	1289	No protein	-	lncRNA	-	-
ENST00000759120.1	LINC01118-255	1275	No protein	-	lncRNA	-	-
ENST00000759136.1	LINC01118-271	1272	No protein	-	lncRNA	-	-
ENST00000759127.1	LINC01118-262	1262	No protein	-	lncRNA	-	-
ENST00000759161.1	LINC01118-296	1251	No protein	-	lncRNA	-	-
ENST00000759147.1	LINC01118-282	1239	No protein	-	lncRNA	-	-
ENST00000759131.1	LINC01118-266	1224	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759155.1	LINC01118-290	1206	No protein	-	lncRNA	-	-
ENST00000759468.1	LINC01118-304	1205	No protein	-	lncRNA	-	-
ENST00000759159.1	LINC01118-294	1192	No protein	-	lncRNA	-	-
ENST00000759158.1	LINC01118-293	1180	No protein	-	lncRNA	-	-
ENST00000759163.1	LINC01118-298	1176	No protein	-	lncRNA	-	-
ENST00000692576.2	LINC01118-211	1173	No protein	-	lncRNA	-	-
ENST00000686485.3	LINC01118-210	1168	No protein	-	lncRNA	-	-
ENST00000759150.1	LINC01118-285	1168	No protein	-	lncRNA	-	-
ENST00000759140.1	LINC01118-275	1157	No protein	-	lncRNA	-	-
ENST00000759152.1	LINC01118-287	1152	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759138.1	LINC01118-273	1145	No protein	-	lncRNA	-	-
ENST00000759156.1	LINC01118-291	1117	No protein	-	lncRNA	-	-
ENST00000759480.1	LINC01118-316	1115	No protein	-	lncRNA	-	-
ENST00000759141.1	LINC01118-276	1108	No protein	-	lncRNA	-	-
ENST00000759139.1	LINC01118-274	1103	No protein	-	lncRNA	-	-
ENST00000759121.1	LINC01118-256	1100	No protein	-	lncRNA	-	-
ENST00000409912.6	LINC01118-202	1094	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000759473.1	LINC01118-309	1092	No protein	-	lncRNA	-	-
ENST00000759160.1	LINC01118-295	1082	No protein	-	lncRNA	-	-
ENST00000759080.1	LINC01118-215	1069	No protein	-	lncRNA	-	-
ENST00000759144.1	LINC01118-279	1067	No protein	-	lncRNA	-	-
ENST00000759162.1	LINC01118-297	1062	No protein	-	lncRNA	-	-
ENST00000759142.1	LINC01118-277	1056	No protein	-	lncRNA	-	-
ENST00000759471.1	LINC01118-307	1042	No protein	-	lncRNA	-	-
ENST00000759145.1	LINC01118-280	1035	No protein	-	lncRNA	-	-
ENST00000759467.1	LINC01118-303	1017	No protein	-	lncRNA	-	-
ENST00000759472.1	LINC01118-308	1003	No protein	-	lncRNA	-	-
ENST00000759082.1	LINC01118-217	1000	No protein	-	lncRNA	-	-
ENST00000759081.1	LINC01118-216	987	No protein	-	lncRNA	-	-
ENST00000759153.1	LINC01118-288	987	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759474.1	LINC01118-310	978	No protein	-	lncRNA	-	-
ENST00000759146.1	LINC01118-281	967	No protein	-	lncRNA	-	-
ENST00000759149.1	LINC01118-284	962	No protein	-	lncRNA	-	-
ENST00000759137.1	LINC01118-272	958	No protein	-	lncRNA	-	-
ENST00000759148.1	LINC01118-283	957	No protein	-	lncRNA	-	-
ENST00000759475.1	LINC01118-311	943	No protein	-	lncRNA	-	-
ENST00000759470.1	LINC01118-306	937	No protein	-	lncRNA	-	-
ENST00000759476.1	LINC01118-312	898	No protein	-	lncRNA	-	-
ENST00000759078.1	LINC01118-213	889	No protein	-	lncRNA	-	-
ENST00000759079.1	LINC01118-214	868	No protein	-	lncRNA	-	-
ENST00000759477.1	LINC01118-313	839	No protein	-	lncRNA	-	-
ENST00000409518.1	LINC01118-201	834	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000495449.1	LINC01118-207	803	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000759487.1	LINC01118-323	791	No protein	-	lncRNA	-	-
ENST00000759083.1	LINC01118-218	773	No protein	-	lncRNA	-	-
ENST00000759130.1	LINC01118-265	773	No protein	-	lncRNA	-	-
ENST00000759466.1	LINC01118-302	712	No protein	-	lncRNA	-	-
ENST00000759129.1	LINC01118-264	710	No protein	-	lncRNA	-	-
ENST00000759486.1	LINC01118-322	642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000759133.1	LINC01118-268	582	No protein	-	lncRNA	-	-
ENST00000759165.1	LINC01118-300	508	No protein	-	lncRNA	-	-
ENST00000759481.1	LINC01118-317	467	No protein	-	lncRNA	-	-
ENST00000759077.1	LINC01118-212	432	No protein	-	lncRNA	-	-
ENST00000759132.1	LINC01118-267	329	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,338 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000422294.5

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000422294.5 LINC01118-203

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Transcript: ENST00000422294.5 LINC01118-203

Summary

About Us

Get help

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