Transcript: ENST00000421378.4 AHI1-DT-201

Description

AHI1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:32526]

Gene Synonyms

C6ORF217, LINC00271, NCRNA00271

Location

Chromosome 6: 135,497,803-135,690,838 forward strand.

About this transcript

This transcript has 4 exons and maps to 259 oligo probes.

Gene

This transcript is a product of gene ENSG00000231028.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000702072.1	AHI1-DT-225	1338	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655302.1	AHI1-DT-209	4216	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664629.1	AHI1-DT-213	2614	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658067.1	AHI1-DT-211	2565	No protein	-	lncRNA	-	-
ENST00000662332.1	AHI1-DT-212	1976	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653664.1	AHI1-DT-208	1715	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655480.2	AHI1-DT-210	1678	No protein	-	lncRNA	-	-
ENST00000421378.4	AHI1-DT-201	1634	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000666467.1	AHI1-DT-215	1597	No protein	-	lncRNA	-	-
ENST00000691507.1	AHI1-DT-223	1556	No protein	-	lncRNA	-	-
ENST00000664883.1	AHI1-DT-214	1429	No protein	-	lncRNA	-	-
ENST00000685995.1	AHI1-DT-217	1316	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808307.1	AHI1-DT-239	1310	No protein	-	lncRNA	-	-
ENST00000808296.1	AHI1-DT-228	1291	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808302.1	AHI1-DT-234	1268	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808300.1	AHI1-DT-232	1248	No protein	-	lncRNA	-	-
ENST00000579339.6	AHI1-DT-205	1234	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000438618.2	AHI1-DT-203	1202	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000808301.1	AHI1-DT-233	1189	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808298.1	AHI1-DT-230	1171	No protein	-	lncRNA	-	-
ENST00000684828.2	AHI1-DT-216	1154	No protein	-	lncRNA	-	-
ENST00000808299.1	AHI1-DT-231	1145	No protein	-	lncRNA	-	-
ENST00000808308.1	AHI1-DT-240	1144	No protein	-	lncRNA	-	-
ENST00000808295.1	AHI1-DT-227	1109	No protein	-	lncRNA	-	-
ENST00000690121.2	AHI1-DT-220	1061	No protein	-	lncRNA	-	-
ENST00000808303.1	AHI1-DT-235	1060	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000689196.1	AHI1-DT-219	1055	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808315.1	AHI1-DT-247	1033	No protein	-	lncRNA	-	-
ENST00000690403.2	AHI1-DT-221	1008	No protein	-	lncRNA	-	-
ENST00000808306.1	AHI1-DT-238	982	No protein	-	lncRNA	-	-
ENST00000808313.1	AHI1-DT-245	958	No protein	-	lncRNA	-	-
ENST00000808312.1	AHI1-DT-244	907	No protein	-	lncRNA	-	-
ENST00000808297.1	AHI1-DT-229	898	No protein	-	lncRNA	-	-
ENST00000692483.3	AHI1-DT-224	884	No protein	-	lncRNA	-	-
ENST00000808294.1	AHI1-DT-226	869	No protein	-	lncRNA	-	-
ENST00000808321.1	AHI1-DT-253	836	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000808314.1	AHI1-DT-246	831	No protein	-	lncRNA	-	-
ENST00000808324.1	AHI1-DT-256	829	No protein	-	lncRNA	-	-
ENST00000808317.1	AHI1-DT-249	824	No protein	-	lncRNA	-	-
ENST00000690910.2	AHI1-DT-222	795	No protein	-	lncRNA	-	-
ENST00000808325.1	AHI1-DT-257	775	No protein	-	lncRNA	-	-
ENST00000808326.1	AHI1-DT-258	772	No protein	-	lncRNA	-	-
ENST00000808310.1	AHI1-DT-242	725	No protein	-	lncRNA	-	-
ENST00000808304.1	AHI1-DT-236	709	No protein	-	lncRNA	-	-
ENST00000808329.1	AHI1-DT-261	704	No protein	-	lncRNA	-	-
ENST00000808319.1	AHI1-DT-251	696	No protein	-	lncRNA	-	-
ENST00000808311.1	AHI1-DT-243	675	No protein	-	lncRNA	-	-
ENST00000808333.1	AHI1-DT-265	672	No protein	-	lncRNA	-	-
ENST00000808322.1	AHI1-DT-254	668	No protein	-	lncRNA	-	-
ENST00000808318.1	AHI1-DT-250	664	No protein	-	lncRNA	-	-
ENST00000436554.5	AHI1-DT-202	655	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000808323.1	AHI1-DT-255	637	No protein	-	lncRNA	-	-
ENST00000808320.1	AHI1-DT-252	630	No protein	-	lncRNA	-	-
ENST00000580741.5	AHI1-DT-207	596	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000808332.1	AHI1-DT-264	593	No protein	-	lncRNA	-	-
ENST00000686835.3	AHI1-DT-218	579	No protein	-	lncRNA	-	-
ENST00000808316.1	AHI1-DT-248	573	No protein	-	lncRNA	-	-
ENST00000808309.1	AHI1-DT-241	557	No protein	-	lncRNA	-	-
ENST00000579057.5	AHI1-DT-204	464	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000579944.1	AHI1-DT-206	464	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000808331.1	AHI1-DT-263	455	No protein	-	lncRNA	-	-
ENST00000808305.1	AHI1-DT-237	445	No protein	-	lncRNA	-	-
ENST00000808327.1	AHI1-DT-259	428	No protein	-	lncRNA	-	-
ENST00000808330.1	AHI1-DT-262	414	No protein	-	lncRNA	-	-
ENST00000808334.1	AHI1-DT-266	404	No protein	-	lncRNA	-	-
ENST00000808328.1	AHI1-DT-260	402	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,634 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000421378.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000421378.4 AHI1-DT-201

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Transcript: ENST00000421378.4 AHI1-DT-201

Summary

About Us

Get help

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