Transcript: ENST00000420557.3 LINC00574-201

Description

long intergenic non-protein coding RNA 574 [Source:HGNC Symbol;Acc:HGNC:21598]

Gene Synonyms

C6ORF208, CRALA, DJ182D15.1, FLJ13162

Location

About this transcript

This transcript has 3 exons, is associated with 5230 variant alleles and maps to 251 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000420557.3	LINC00574-201	2582	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000689618.2	LINC00574-203	2240	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000690995.1	LINC00574-204	1340	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000686336.2	LINC00574-202	889	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,582 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000420557.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.