Human (GRCh38.p14)
Description

LETM1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24241]

Gene Synonyms

HCCR, HCCR-1, HCCR-2, HCCR1, HCCR2, SLC55A3

Location
About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 5373 variant alleles and maps to 588 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000262055.9LETMD1-2012106360aaENSP00000262055.4
 
Protein coding
CCDS8806Q6P1Q0-1 NM_015416.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000418425.6LETMD1-2032123373aaENSP00000389903.2
 
Protein coding
CCDS58231Q6P1Q0-7 -GENCODE basicTSL:2
ENST00000552739.5LETMD1-2351713243aaENSP00000450333.1
 
Protein coding
CCDS86301F8VP71 -GENCODE basicTSL:2
ENST00000547008.5LETMD1-2061665236aaENSP00000447419.1
 
Protein coding
CCDS73469F8W1Z2 -GENCODE basicTSL:2
ENST00000550929.5LETMD1-2281389304aaENSP00000450163.1
 
Protein coding
CCDS44883Q6P1Q0-2 -GENCODE basicTSL:1
ENST00000551477.5LETMD1-2301186290aaENSP00000446862.1
 
Protein coding
F8VZA2 -TSL:3CDS 3' incomplete
ENST00000549340.5LETMD1-218818260aaENSP00000449896.1
 
Protein coding
F8VVQ3 -TSL:5CDS 3' incomplete
ENST00000553043.1LETMD1-23672798aaENSP00000446967.1
 
Protein coding
H0YHF4 -TSL:2CDS 5' incomplete
ENST00000551931.5LETMD1-231705144aaENSP00000450251.1
 
Protein coding
H0YIV5 -TSL:3CDS 5' incomplete
ENST00000547256.1LETMD1-208618110aaENSP00000446551.1
 
Protein coding
H0YH93 -TSL:2CDS 5' incomplete
ENST00000547660.5LETMD1-211601109aaENSP00000450391.1
 
Protein coding
F8VR33 -TSL:4CDS 3' incomplete
ENST00000548251.5LETMD1-214582184aaENSP00000447166.1
 
Protein coding
F8W0R0 -TSL:3CDS 3' incomplete
ENST00000548209.5LETMD1-213568179aaENSP00000450275.1
 
Protein coding
F8VPY5 -TSL:4CDS 3' incomplete
ENST00000550814.5LETMD1-227565158aaENSP00000448222.1
 
Protein coding
F8VS60 -TSL:4CDS 3' incomplete
ENST00000550442.5LETMD1-223469144aaENSP00000448110.1
 
Protein coding
F8VTR1 -TSL:4CDS 3' incomplete
ENST00000548401.1LETMD1-216433135aaENSP00000450082.1
 
Protein coding
F8VQE7 -TSL:3CDS 3' incomplete
ENST00000547318.5LETMD1-2092001138aaENSP00000448442.1
 
Nonsense mediated decay
F8WCD9 -TSL:1
ENST00000547555.5LETMD1-210165841aaENSP00000450390.1
 
Nonsense mediated decay
F8VR35 -TSL:5
ENST00000380135.7LETMD1-2021566147aaENSP00000369478.3
 
Nonsense mediated decay
F8W6J0 -TSL:3
ENST00000550100.5LETMD1-2211480155aaENSP00000447047.1
 
Nonsense mediated decay
Q6P1Q0-3 -TSL:2
ENST00000549686.5LETMD1-22056343aaENSP00000447420.1
 
Nonsense mediated decay
F8W1U1 -TSL:2
ENST00000550755.5LETMD1-22655243aaENSP00000449681.1
 
Nonsense mediated decay
F8VUZ8 -TSL:4
ENST00000551261.5LETMD1-22952199aaENSP00000448800.1
 
Nonsense mediated decay
F8VXQ4 -TSL:5
ENST00000548516.5LETMD1-217850No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000552430.5LETMD1-232608No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000550446.5LETMD1-224562No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000553175.5LETMD1-237555No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000549395.1LETMD1-219475No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000547029.5LETMD1-207455No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000547877.5LETMD1-2122020No protein-
 
Retained intron
--TSL:5
ENST00000552645.5LETMD1-2341623No protein-
 
Retained intron
--TSL:1
ENST00000550715.5LETMD1-225907No protein-
 
Retained intron
--TSL:2
ENST00000546814.1LETMD1-204894No protein-
 
Retained intron
--TSL:2
ENST00000550274.1LETMD1-222809No protein-
 
Retained intron
--TSL:2
ENST00000552433.1LETMD1-233727No protein-
 
Retained intron
--TSL:2
ENST00000546992.5LETMD1-205578No protein-
 
Retained intron
--TSL:4
ENST00000548390.5LETMD1-215549No protein-
 
Retained intron
--TSL:2
ENST00000623495.1LETMD1-2382948No protein-
 
TEC
--TSL:NA
Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,123 bps, Translation length: 373 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1Q0

CCDS

This transcript is a member of the Human CCDS set: CCDS58231

Transcript Support Level (TSL)

TSL:2

Version

ENST00000418425.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.