Transcript: ENST00000418218.5 UICLM-201

Description

up-regulated in colorectal cancer liver metastasis [Source:HGNC Symbol;Acc:HGNC:54869]

Gene Synonyms

CROCC2-AS1

Location

Chromosome 2: 240,954,617-240,967,451 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 6874 variant alleles and maps to 380 oligo probes.

Gene

This transcript is a product of gene ENSG00000233392.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000438506.1	UICLM-202	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000418218.5	UICLM-201	2274	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000457369.1	UICLM-203	800	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 2,274 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000418218.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000418218.5 UICLM-201

Summary

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Transcript: ENST00000418218.5 UICLM-201

Summary

About Us

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