Human (GRCh38.p14)
Description

intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]

Gene Synonyms

BBS20, NPHP17, OSM-1, SLB, WIM

Location
About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 7593 variant alleles and maps to 359 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000260570.8IFT172-20153951749aaENSP00000260570.3
 
Protein coding
CCDS1755Q9UG01-1 NM_015662.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000675690.1IFT172-22553401727aaENSP00000502283.1
 
Protein coding
CCDS92725A0A6Q8PGJ2 -GENCODE basic
ENST00000359466.10IFT172-2022207532aaENSP00000352443.6
 
Protein coding
Q9UG01-3 -GENCODE basicTSL:1
ENST00000416524.2IFT172-2031982511aaENSP00000407408.2
 
Protein coding
F5GZ56 -GENCODE basicTSL:2
ENST00000675728.1IFT172-2261920511aaENSP00000501700.1
 
Protein coding
F5GZ56 -GENCODE basic
ENST00000443889.1IFT172-205690196aaENSP00000404082.1
 
Protein coding
H7C252 -TSL:2CDS 5' incomplete
ENST00000674701.1IFT172-2206271532aaENSP00000502275.1
 
Nonsense mediated decay
Q9UG01-3 --
ENST00000674932.1IFT172-222613398aaENSP00000501967.1
 
Nonsense mediated decay
A0A6Q8PFU9 --
ENST00000675410.1IFT172-2235901715aaENSP00000502030.1
 
Nonsense mediated decay
A0A6Q8PG03 --
ENST00000674824.1IFT172-2215391536aaENSP00000501824.1
 
Nonsense mediated decay
A0A6Q8PFK2 --
ENST00000676119.1IFT172-2335113191aaENSP00000501701.1
 
Nonsense mediated decay
A0A6Q8PFB6 --
ENST00000675729.1IFT172-2273222455aaENSP00000502319.1
 
Nonsense mediated decay
A0A6Q8PGK4 --
ENST00000675963.1IFT172-2312585126aaENSP00000502708.1
 
Nonsense mediated decay
A0A6Q8PHF0 --
ENST00000509128.5IFT172-2171723324aaENSP00000427255.1
 
Nonsense mediated decay
H0YAI8 -TSL:1CDS 5' incomplete
ENST00000450564.1IFT172-20676096aaENSP00000399017.1
 
Nonsense mediated decay
H7C186 -TSL:3CDS 5' incomplete
ENST00000420854.1IFT172-204569162aaENSP00000398633.1
 
Nonsense mediated decay
H7C161 -TSL:5CDS 5' incomplete
ENST00000507184.5IFT172-2165565No protein-
 
Retained intron
--TSL:5
ENST00000676300.1IFT172-2344094No protein-
 
Retained intron
---
ENST00000675826.1IFT172-2293395No protein-
 
Retained intron
---
ENST00000476264.7IFT172-2103005No protein-
 
Retained intron
--TSL:2
ENST00000675618.1IFT172-2242960No protein-
 
Retained intron
---
ENST00000676101.1IFT172-2322941No protein-
 
Retained intron
---
ENST00000675925.1IFT172-2302658No protein-
 
Retained intron
---
ENST00000511842.5IFT172-2181832No protein-
 
Retained intron
--TSL:5
ENST00000674594.1IFT172-2191685No protein-
 
Retained intron
---
ENST00000475476.2IFT172-208781No protein-
 
Retained intron
--TSL:2
ENST00000675757.1IFT172-228718No protein-
 
Retained intron
---
ENST00000489492.1IFT172-214653No protein-
 
Retained intron
--TSL:3
ENST00000494163.1IFT172-215607No protein-
 
Retained intron
--TSL:3
ENST00000476693.1IFT172-211517No protein-
 
Retained intron
--TSL:5
ENST00000480892.1IFT172-213477No protein-
 
Retained intron
--TSL:3
ENST00000479419.1IFT172-212420No protein-
 
Retained intron
--TSL:3
ENST00000475909.1IFT172-209402No protein-
 
Retained intron
--TSL:5
ENST00000463613.1IFT172-207360No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 16, Coding exons: 14, Transcript length: 1,982 bps, Translation length: 511 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000416524.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.