Transcript: ENST00000415787.1 RCAN2-DT-201

Description

RCAN2 divergent transcript [Source:HGNC Symbol;Acc:HGNC:55661]

Location

Chromosome 6: 46,492,052-46,532,758 forward strand.

About this transcript

This transcript has 3 exons and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000236466.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000657801.2	RCAN2-DT-202	755	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664425.2	RCAN2-DT-203	4902	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665854.1	RCAN2-DT-204	4193	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762074.1	RCAN2-DT-210	1848	No protein	-	lncRNA	-	-
ENST00000762087.1	RCAN2-DT-223	1339	No protein	-	lncRNA	-	-
ENST00000762078.1	RCAN2-DT-214	1300	No protein	-	lncRNA	-	-
ENST00000762088.1	RCAN2-DT-224	1150	No protein	-	lncRNA	-	-
ENST00000762075.1	RCAN2-DT-211	1056	No protein	-	lncRNA	-	-
ENST00000762077.1	RCAN2-DT-213	1023	No protein	-	lncRNA	-	-
ENST00000762079.1	RCAN2-DT-215	983	No protein	-	lncRNA	-	-
ENST00000762076.1	RCAN2-DT-212	904	No protein	-	lncRNA	-	-
ENST00000762070.1	RCAN2-DT-206	848	No protein	-	lncRNA	-	-
ENST00000762073.1	RCAN2-DT-209	835	No protein	-	lncRNA	-	-
ENST00000762080.1	RCAN2-DT-216	735	No protein	-	lncRNA	-	-
ENST00000762069.1	RCAN2-DT-205	729	No protein	-	lncRNA	-	-
ENST00000762085.1	RCAN2-DT-221	712	No protein	-	lncRNA	-	-
ENST00000762082.1	RCAN2-DT-218	703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762071.1	RCAN2-DT-207	680	No protein	-	lncRNA	-	-
ENST00000415787.1	RCAN2-DT-201	622	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000762081.1	RCAN2-DT-217	597	No protein	-	lncRNA	-	-
ENST00000762072.1	RCAN2-DT-208	590	No protein	-	lncRNA	-	-
ENST00000762086.1	RCAN2-DT-222	524	No protein	-	lncRNA	-	-
ENST00000762089.1	RCAN2-DT-225	520	No protein	-	lncRNA	-	-
ENST00000762083.1	RCAN2-DT-219	516	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000762084.1	RCAN2-DT-220	406	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 622 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000415787.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000415787.1 RCAN2-DT-201

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Transcript: ENST00000415787.1 RCAN2-DT-201

Summary

About Us

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