Transcript: ENST00000415652.2 LINC01022-201

Description

long intergenic non-protein coding RNA 1022 [Source:HGNC Symbol;Acc:HGNC:48998]

Gene Synonyms

TCONS_00013107

Location

Chromosome 7: 158,588,370-158,591,120 forward strand.

About this transcript

This transcript has 3 exons and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSG00000232715.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000807061.1	LINC01022-202	772	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000807066.1	LINC01022-207	975	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807062.1	LINC01022-203	815	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807063.1	LINC01022-204	756	No protein	-	lncRNA	-	-
ENST00000807067.1	LINC01022-208	661	No protein	-	lncRNA	-	-
ENST00000807064.1	LINC01022-205	651	No protein	-	lncRNA	-	-
ENST00000415652.2	LINC01022-201	526	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000807065.1	LINC01022-206	515	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 526 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000415652.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000415652.2 LINC01022-201

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Transcript: ENST00000415652.2 LINC01022-201

Summary

About Us

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