Transcript: ENST00000415649.4 HLA-E-216

Description

major histocompatibility complex, class I, E [Source:HGNC Symbol;Acc:HGNC:4962]

Location

Scaffold HSCHR6_MHC_COX_CTG1: 1,969,202-1,973,940 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 94 domains and features, is associated with 1974 variant alleles and maps to 2027 oligo probes.

Gene

This transcript is a product of gene ENSG00000233904.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000415649.4	HLA-E-216	2601	358aa	ENSP00000390707.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13747 Q6DU50	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000463494.1	HLA-E-217	907	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000480259.1	HLA-E-218	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,601 bps, Translation length: 358 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13747

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000415649.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000415649.4 HLA-E-216

Summary

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Transcript: ENST00000415649.4 HLA-E-216

Summary

About Us

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