Transcript: ENST00000414300.2 LINC01885-201

Description

long intergenic non-protein coding RNA 1885 [Source:HGNC Symbol;Acc:HGNC:52704]

Location

Chromosome 2: 107,382,715-107,542,649 reverse strand.

About this transcript

This transcript has 6 exons and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSG00000237880.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000654481.1	LINC01885-202	1969	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767864.1	LINC01885-203	2337	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000414300.2	LINC01885-201	2093	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000767865.1	LINC01885-204	2044	No protein	-	lncRNA	-	-
ENST00000767866.1	LINC01885-205	1999	No protein	-	lncRNA	-	-
ENST00000767867.1	LINC01885-206	1957	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,093 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000414300.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000414300.2 LINC01885-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000414300.2 LINC01885-201

Summary

About Us

Get help

Our sister sites

Follow us