Human (GRCh38.p14)
Description

nucleotide binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16390]

Gene Synonyms

CARD4, CLR7.1, NLRC1

Location
About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 8748 variant alleles and maps to 184 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000222823.9NOD1-2014503953aaENSP00000222823.4
 
Protein coding
CCDS5427Q9Y239-1 NM_006092.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000411552.5NOD1-20279459aaENSP00000396046.1
 
Protein coding
A0A1B0GX71 -TSL:1CDS 3' incomplete
ENST00000419799.5NOD1-20575759aaENSP00000395551.1
 
Protein coding
A0A1B0GX71 -TSL:1CDS 3' incomplete
ENST00000413433.5NOD1-20363759aaENSP00000399505.1
 
Protein coding
A0A1B0GX71 -TSL:1CDS 3' incomplete
ENST00000419601.1NOD1-20457845aaENSP00000410917.1
 
Protein coding
C9J8X8 -TSL:1CDS 3' incomplete
ENST00000434755.5NOD1-2064610779aaENSP00000416946.1
 
Nonsense mediated decay
G3XAL1 -TSL:2
ENST00000489614.5NOD1-2083098No protein-
 
Retained intron
--TSL:2
ENST00000467706.1NOD1-207905No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 1, Transcript length: 637 bps, Translation length: 59 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 3' incomplete

Version

ENST00000413433.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.