Transcript: ENST00000412690.2 LINC01191-201

Description

long intergenic non-protein coding RNA 1191 [Source:HGNC Symbol;Acc:HGNC:49595]

Gene Synonyms

LNC-ACTR3, VIN

Location

Chromosome 2: 113,979,556-114,007,321 forward strand.

About this transcript

This transcript has 2 exons and maps to 241 oligo probes.

Gene

This transcript is a product of gene ENSG00000234199.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000828060.1	LINC01191-208	651	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000658731.1	LINC01191-204	1339	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828069.1	LINC01191-217	1111	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656323.1	LINC01191-203	979	No protein	-	lncRNA	-	-
ENST00000663402.1	LINC01191-206	922	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828064.1	LINC01191-212	917	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828068.1	LINC01191-216	906	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670955.1	LINC01191-207	889	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000412690.2	LINC01191-201	876	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000828062.1	LINC01191-210	831	No protein	-	lncRNA	-	-
ENST00000420161.1	LINC01191-202	815	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000828063.1	LINC01191-211	807	No protein	-	lncRNA	-	-
ENST00000828065.1	LINC01191-213	710	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660948.2	LINC01191-205	707	No protein	-	lncRNA	-	-
ENST00000828162.1	LINC01191-220	630	No protein	-	lncRNA	-	-
ENST00000828070.1	LINC01191-218	578	No protein	-	lncRNA	-	-
ENST00000828067.1	LINC01191-215	483	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000828066.1	LINC01191-214	457	No protein	-	lncRNA	-	-
ENST00000828163.1	LINC01191-221	449	No protein	-	lncRNA	-	-
ENST00000828071.1	LINC01191-219	446	No protein	-	lncRNA	-	-
ENST00000828061.1	LINC01191-209	423	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 876 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000412690.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000412690.2 LINC01191-201

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Transcript: ENST00000412690.2 LINC01191-201

Summary

About Us

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