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Human (GRCh38.p14)
Description

C1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:HGNC:29911]

Gene Synonyms

LRP1, RRP47, SUN-COR, SUNCOR

Location
About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 9067 variant alleles and maps to 465 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000410067.8C1D-2042241141aaENSP00000386468.3
 
Protein coding
CCDS1883Q13901 NM_173177.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000871248.2C1D-2173809141aaENSP00000541307.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871247.2C1D-2162573141aaENSP00000541306.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000407324.6C1D-2022498180aaENSP00000384304.1
 
Protein coding
J3KPZ4 -GENCODE BasicTSL:3
ENST00000871243.2C1D-2142444141aaENSP00000541302.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000937571.2C1D-2212391141aaENSP00000607630.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104872.1C1D-2482377141aaENSP00000774675.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104868.1C1D-2442366141aaENSP00000774671.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000941552.2C1D-2252357141aaENSP00000611611.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871245.2C1D-2152354141aaENSP00000541303.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000941549.2C1D-2222354141aaENSP00000611608.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000937569.2C1D-2192351141aaENSP00000607628.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871240.2C1D-2112349141aaENSP00000541299.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871238.2C1D-2092347141aaENSP00000541297.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104862.1C1D-2382342141aaENSP00000774665.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871241.2C1D-2122333141aaENSP00000541300.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104870.1C1D-2462329141aaENSP00000774673.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000409302.2C1D-2032319141aaENSP00000386779.1
 
Protein coding
CCDS1883Q13901 -GENCODE BasicAPPRIS P1TSL:5
ENST00001104863.1C1D-2392317141aaENSP00000774666.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000941551.2C1D-2242312141aaENSP00000611610.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104867.1C1D-2432301141aaENSP00000774670.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000937570.2C1D-2202284141aaENSP00000607629.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104871.1C1D-2472275141aaENSP00000774674.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871239.2C1D-2102268141aaENSP00000541298.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000941550.2C1D-2232264141aaENSP00000611609.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000937568.2C1D-2182262141aaENSP00000607627.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871237.2C1D-2082254141aaENSP00000541296.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104861.1C1D-2372245141aaENSP00000774664.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000871242.2C1D-2132244141aaENSP00000541301.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00000355848.7C1D-2012233141aaENSP00000348107.3
 
Protein coding
CCDS1883Q13901 -GENCODE BasicAPPRIS P1TSL:1
ENST00001071381.1C1D-229212760aaENSP00000741187.1
 
Protein coding
--GENCODE Basic
ENST00001104858.1C1D-2341265133aaENSP00000774661.1
 
Protein coding
--GENCODE Basic
ENST00001104857.1C1D-233120077aaENSP00000774660.1
 
Protein coding
--GENCODE Basic
ENST00001104859.1C1D-2351196133aaENSP00000774662.1
 
Protein coding
--GENCODE Basic
ENST00001104865.1C1D-241119460aaENSP00000774668.1
 
Protein coding
--GENCODE Basic
ENST00001104864.1C1D-240117860aaENSP00000774667.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00001071389.1C1D-2311170133aaENSP00000741195.1
 
Protein coding
--GENCODE Basic
ENST00001104860.1C1D-2361169131aaENSP00000774663.1
 
Protein coding
--GENCODE Basic
ENST00001071387.1C1D-230112360aaENSP00000741193.1
 
Protein coding
--GENCODE Basic
ENST00001071393.1C1D-232110560aaENSP00000741199.1
 
Protein coding
--GENCODE Basic
ENST00001104866.1C1D-242109860aaENSP00000774669.1
 
Protein coding
--GENCODE Basic
ENST00001104875.1C1D-251563133aaENSP00000774678.1
 
Protein coding
--GENCODE Basic
ENST00001104876.1C1D-252547141aaENSP00000774679.1
 
Protein coding
CCDS1883--GENCODE BasicAPPRIS P1
ENST00001104874.1C1D-250473133aaENSP00000774677.1
 
Protein coding
--GENCODE Basic
ENST00001104877.1C1D-25345260aaENSP00000774680.1
 
Protein coding
--GENCODE Basic
ENST00001104869.1C1D-245127048aaENSP00000774672.1
 
Nonsense mediated decay
---
ENST00001021304.1C1D-228119348aaENSP00000691121.1
 
Nonsense mediated decay
---
ENST00001021303.1C1D-227118148aaENSP00000691120.1
 
Nonsense mediated decay
---
ENST00000999106.1C1D-226112148aaENSP00000668923.1
 
Nonsense mediated decay
---
ENST00001104873.1C1D-24954564aaENSP00000774676.1
 
Nonsense mediated decay
---
ENST00000470189.2C1D-205665No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000485709.1C1D-207842No protein-
 
Retained intron
--TSL:3
ENST00000479484.1C1D-206621No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,241 bps, Translation length: 141 residues

MANE

This MANE Select transcript contains ENSP00000386468 and matches to NM_173177.3 and NP_775269.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13901

CCDS

This transcript is a member of the Human CCDS set: CCDS1883

Transcript Support Level (TSL)

TSL:1

Version

ENST00000410067.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

alternative 5' UTR [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.