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Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 9 [Source:HGNC Symbol;Acc:HGNC:10597]

Gene Synonyms

ETHA, NAV1.7, NE-NA, NENA, PN1

About this transcript

This transcript has 27 exons, is annotated with 129 domains and features, is associated with 80095 variant alleles and maps to 836 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000642356.2SCN9A-20697521988aaENSP00000495601.1
 
Protein coding
CCDS92892Q15858-1 NM_001365536.1MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000409672.5SCN9A-20297681977aaENSP00000386306.1
 
Protein coding
CCDS46441Q15858-3 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000303354.11SCN9A-20196981988aaENSP00000304748.7
 
Protein coding
CCDS92892Q15858-1 -GENCODE BasicAPPRIS P1TSL:5
ENST00000645907.1SCN9A-21073921977aaENSP00000495983.1
 
Protein coding
Q15858-4 -GENCODE PrimaryGENCODE Basic
ENST00000454569.6SCN9A-2043231832aaENSP00000413212.2
 
Protein coding
A0A0C4DG82 -GENCODE PrimaryGENCODE BasicTSL:1
ENST00000452182.2SCN9A-2031473378aaENSP00000393141.2
 
Protein coding
H7C064 -TSL:1CDS 3' incomplete
ENST00000645283.1SCN9A-2081097194aaENSP00000496086.1
 
Protein coding
A0A2R8Y7G0 -CDS 5' incomplete
ENST00000667201.2SCN9A-2122255645aaENSP00000499341.2
 
Nonsense mediated decay
A0A590UJB2 -CDS 5' incomplete
ENST00000643319.1SCN9A-207587118aaENSP00000494071.1
 
Nonsense mediated decay
A0A2R8YCX9 -CDS 5' incomplete
ENST00000667991.1SCN9A-21352788aaENSP00000499663.1
 
Nonsense mediated decay
A0A590UK23 --
ENST00000646694.1SCN9A-2112717No protein-
 
Retained intron
---
ENST00000472119.2SCN9A-2052283No protein-
 
Retained intron
--TSL:2
ENST00000645815.1SCN9A-2092188No protein-
 
Retained intron
---
Statistics

Exons: 27, Coding exons: 26, Transcript length: 9,768 bps, Translation length: 1,977 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15858

CCDS

This transcript is a member of the Human CCDS set: CCDS46441

Transcript Support Level (TSL)

TSL:5

Version

ENST00000409672.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non canonical U12 [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.