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Human (GRCh38.p14)
Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17162]

Gene Synonyms

YER146W

Location
About this transcript

This transcript has 5 exons, is annotated with 8 domains and features and maps to 292 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000450169.7LSM5-208221491aaENSP00000410758.2
 
Protein coding
CCDS5438Q9Y4Y9-1 NM_012322.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENST00000409909.7LSM5-20474062aaENSP00000386363.3
 
Protein coding
CCDS47571Q9Y4Y9-2 -GENCODE BasicTSL:2
ENST00000410044.5LSM5-20768762aaENSP00000386707.1
 
Protein coding
CCDS47571Q9Y4Y9-2 -GENCODE BasicTSL:3
ENST00000409952.3LSM5-20568762aaENSP00000387126.3
 
Protein coding
CCDS47571Q9Y4Y9-2 -GENCODE BasicTSL:4
ENST00000409782.5LSM5-20364962aaENSP00000387109.1
 
Protein coding
CCDS47571Q9Y4Y9-2 -GENCODE BasicTSL:5
ENST00000409292.5LSM5-20253862aaENSP00000386814.1
 
Protein coding
CCDS47571Q9Y4Y9-2 -GENCODE BasicTSL:2
ENST00000409987.5LSM5-20650464aaENSP00000386275.1
 
Protein coding
B8ZZF8 -GENCODE PrimaryGENCODE BasicTSL:5
ENST00000223084.7LSM5-201129571aaENSP00000223084.3
 
Nonsense mediated decay
F8W8Y8 -TSL:2
ENST00000480956.1LSM5-2101736No protein-
 
Retained intron
--TSL:3
ENST00000468872.5LSM5-209636No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 538 bps, Translation length: 62 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4Y9

CCDS

This transcript is a member of the Human CCDS set: CCDS47571

Transcript Support Level (TSL)

TSL:2

Version

ENST00000409292.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

alternative 5' UTR [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.